Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00025 ATGGGGGACGGAAGTGGGAACCGGTGGAGCAGGGCGGAGTGGGTGCAGCAGTACGATCTCTTAGGCAAAATCGGAGAAGGCACTTACGGCCTCGTCTTCCTGGCCCGAACCAAAGGCACTCCCTCCAAATCCATCGCCATCAAAAAGTTCAAGCAATCCAAGGACGGCGACGGCGTCTCCCCCACCGCCATCCGCGAAATCATGCTGCTCAGGGAGATTACGCACGAGAACGTCGTCAAGCTCGTCAATGTCCACATCAACCACGCCGACATGTCGCTCTACCTCGCCTTTGATTACGCCGAGCACGATCTCTATGAAATTATTAGGCATCACAGGGATAAACTCAACCATTCCATTAACCAATACACTGTTAAGTCTTTGCTCTGGCAGTTGCTCAATGGACTAAGCTATCTGCACAGTAATTGGATGATACATCGAGATTTGAAGCCATCGAATATATTGGTTATGGGAGAAGGAGAGGAACATGGAGTTGTTAAGATTGCTGACTTTGGACTTGCGAGGATATATCAAGCTCCTCTGAAGCCGTTATCTGATAATGGGGTTGTTGTAACCATTTGGTATCGTGCACCCGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCGCTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCCTTTCAGGTACTTGCTATATCACAGGACATTGTTACTGTGCCAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAGTCTTCCACATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGATAATGCTGGTCTCTATAATGTTGTACACCTGTCTCCAAAAAGCCCCGCATATGACCTCTTGTCAAAGATGCTTGAATATGATCCTCGTAAGCGTTTAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATTGAACCATTACCTGGACGGAATGCACTTGTACCCTGCCAACTTGGAGAGAAAATTGTAAATTATCCCACTCGTCCAGTGGACACCACTACTGATCTTGAAGGAACAACCAATCTGCCACCTTCACAAACGGTAAATGCAGTTTCTGGCAGCATGCCTGGCAGCCATGGGAGACGGAATGAATCCTGGGGGTATCTCAAAGCAACGAGGTGTTCCACAGGCCCATCAGCCGCAACAGTTGAGAAGGAAGGAGCAAATGGGGATGCCGGGATACCCTGCACAACAGAAGTCAAGACGAATATAAGGTTTCTGCTGGAAGAGAGACTACGTGAAGATAAATTTGGGGTCAATACTTCAGTGCCTGAACTCATGCAGGACATTTCTGGACAGGAGCTGCACCTGAAAATGGATGCAAGAAAATGCAATCAAGAACTCAGAAGACCGTGTAACGCACTCCACTGCACTGTTGTTCTCTCTCGAACTTATCAGATGAGCAGAGAAAATACGCCAGCAATGGCAAAGGAAGAAGTCTGTGATGATGGTTCCTCCAGTGTTGAGAATGTGGATTTAGAATCTCATGCTCGAATTAGTCTCGACAAGGATAATGGCTTGGGAACCTGTCGTGTGTGCCAATGTACCGAATCTGATAAAAAGGCAGATGCCGCACTAGAATTTTTGGGCATCATTCCAGGTTCAGAAATGTGTAAAACCAAGGGGGAAGTGGGATCTGATGGTGGTGGCGATGGAATTCCCGAAAATACGTCTCTTGACAGAAATAATGAGAAAAATGCTGGTATGGTGGAATTTGTAAGCCCTAATGGGGAGGTTTTCATTTGTAAAAGCGATTTGGAACTTGGTTTGTGTCATCAAGATAAATTAGTTGAACTTGGATGTTCTTGTAAAAACGACCTTGCTTTAGTACATTATGCTTGTGCACTTAAGTGGTTTGTCAACCATGGATCTACCATTTGTGAAATATGTGGACATATAGCAAATAATATCAGAATTTCTGACTTCAATAAGGTTGTTGGTGCTTTGAAGGAGTATGAAGTATTGAGGGAAAGAACTGCTAGTGGGGATCCTGGTGCCGCACATGTTCATGCAAATGCTGTTGTGGATCCTGATGCTGTGGCTGCTATCCGGAGGCAACGGCTAAGTGAGATTGCACTATGGTTTTGTCCTTATAATAACAGTCACAATAACAACATCAGCAGTGTGGACACAGTTTCACAGATTGTTTCTGAGCAGCCTTTAAGTATTGTTACTGAAGATGCTGCCCCCACACAGAATCCTGCAACCAAGTGGGCCGTGGAGGGTACAGGGATCCTGCTTGCTACGGGGCTGCTTACCATCACCCTTGCATGGCTTATAGCTCCTCGTGTTGGAAAGAAAACTGCTAGAAGTGGTCTTCATATCTTACTTGGAGGAGTTTGTGCTTTAGCCGTGGTGGTTTTCTTCCGCTTTTTTGTGCTTACCAGAATCAAGTATGGACCTGCACGTTATTGGGCAATCTTGTTCGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCAAGGACCCATGGTGCCCACACAACATGA 2565 0.4565 MGDGSGNRWSRAEWVQQYDLLGKIGEGTYGLVFLARTKGTPSKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKLNHSINQYTVKSLLWQLLNGLSYLHSNWMIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATSNPFQVLAISQDIVTVPGHPTLEKWPSLASLPHWQQDVQHIQGHKYDNAGLYNVVHLSPKSPAYDLLSKMLEYDPRKRLTAAQALEHEYFKIEPLPGRNALVPCQLGEKIVNYPTRPVDTTTDLEGTTNLPPSQTVNAVSGSMPGSHGRRNESWGYLKATRCSTGPSAATVEKEGANGDAGIPCTTEVKTNIRFLLEERLREDKFGVNTSVPELMQDISGQELHLKMDARKCNQELRRPCNALHCTVVLSRTYQMSRENTPAMAKEEVCDDGSSSVENVDLESHARISLDKDNGLGTCRVCQCTESDKKADAALEFLGIIPGSEMCKTKGEVGSDGGGDGIPENTSLDRNNEKNAGMVEFVSPNGEVFICKSDLELGLCHQDKLVELGCSCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRISDFNKVVGALKEYEVLRERTASGDPGAAHVHANAVVDPDAVAAIRRQRLSEIALWFCPYNNSHNNNISSVDTVSQIVSEQPLSIVTEDAAPTQNPATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTARSGLHILLGGVCALAVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAHTT 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00025 854 SUPERFAMILY Protein kinase-like (PK-like) 13 328 IPR011009 -
Gma08g00025 854 Pfam Protein kinase domain 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00025 854 PANTHER CYCLIN-DEPENDENT KINASE E-1 9 381 - -
Gma08g00025 854 SUPERFAMILY RING/U-box 617 658 - -
Gma08g00025 854 ProSiteProfiles Zinc finger RING-CH-type profile. 596 662 IPR011016 GO:0008270
Gma08g00025 854 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 665 IPR013083 -
Gma08g00025 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gma08g00025 854 SMART serkin_6 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00025 854 Pfam RING-variant domain 620 655 IPR011016 GO:0008270
Gma08g00025 854 ProSiteProfiles Protein kinase domain profile. 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00025 854 PANTHER CELL DIVISION PROTEIN KINASE 9 381 - -
Gma08g00025 854 Gene3D Phosphorylase Kinase; domain 1 6 99 - -
Gma08g00025 854 MobiDBLite consensus disorder prediction 359 384 - -
Gma08g00025 854 Gene3D Transferase(Phosphotransferase) domain 1 100 342 - -
Gma08g00025 854 CDD STKc_CDK8_like 17 327 - -
Gma08g00025 854 MobiDBLite consensus disorder prediction 359 387 - -
Gma08g00025 854 ProSitePatterns Protein kinases ATP-binding region signature. 24 49 IPR017441 GO:0005524
Gma08g00025 854 SMART ringv_2 606 656 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00025 Gma-Chr8 206161 223994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00025 11 390 Core Cell Cycle Gene Families AT5G63610 79.058 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gma08g00025 Pkinase 3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00025 K02208 - gmx:100807993 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01918 05 40560007 40573588 Gma08g00025 08 206161 223994 GST