Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00024 ATGAAAAGCCTCTGCCTTGGGCCGTTTCTTGCTGCTAGTGCCCCAGTTGGTAGAAGAGCCTATGGAGGCCACTTAAGCAGAAAGTGCTTTCAAAAGCAACTTCACTTCCACTCACGTTGTGTTGCTTTCTCTTCATTCATATGTTCTGCAACTATATCAGTGATGCCAGAATTAGAAGAGAAGCAAGTGTTTGATGGAGAGAAGGCTAATTTGCTAGTTAAAGATCTCAGAAAGAGCTTTGATTCAGGCATGACTAAGAGCTATGGATGGAGGGTTTCCCAGTTGGAAGCCATAGCTAAGATGTTAGAAGAGAAAGAGAAGGAAATTACTGAAGCTCTATATAAGGACCTTGGAAAACCTCGACTTGAAGCATTTATAACCGAGATTTCCCAGGCTAAATCCTCATGTAGTGAAGCACTTAAAGAGCTGAAAGAATGGATGAAGCCTGAGAAGGTGAATACTTCAATCACAACATATCCATCATCAGCAGAGATTGTGCCAGAACCACTGGGGGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTGTTATCAATGGATCCAGTCATTGGAGCCATTTCCGCAGGCAATGCTGTGGTCCTGAAACCATCAGAAATTTCTCCAGCAACATCATCACTGCTTGCAAATTTGATCGAACAATATCTAGACAACTCTACCATAAGAGTTGTTGAAGGGGCTATTCCCGAAACATCTGCACTCCTGGATCAGAAGTGGGATAAGATACTTTATACAGGTAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCAAGGAGGATAATAGCTGGCAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAGTTTGCCCCAAAGCTGGTAGATGCCTTAAAAGAAGAATTGGAACAATTTTTTGGTAAAGATCCTATGGAGTCAAAAGACATGTCAAGAATTGTGTCTCCAAACCAGTTTGCGCGGCTTGTGAATCTCTTGGATGAGGATAAGGTATCTGACAAAATTGTTTTGGGAGGTCAGAGGGATGAGAAGAAATTAAAAATTGCCCCAACTATCATATTGGGTGTTCCTGAAGATGCTATGATAATGCAAGAGGAGATATTTGGGCCAATAATGCCAATCGTCACTGTAGACAATATAGAAGATTGCTACAGTATAATAAAATCAAAGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCTTCTGGAGGGATGCTCATCAATGACGCCGTCATCCATGTTGCAACTCGTGGGTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCACAGGAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCTACCATTAGGTACCCTCCGTATACACCTCAGAAGGAAAAATTATTGAAGGCCCTTATTAGTGGCAATATTGTTCAAATTATTCTTTCTCTTTTGGGGTGGTCTTAA 1626 0.4151 MKSLCLGPFLAASAPVGRRAYGGHLSRKCFQKQLHFHSRCVAFSSFICSATISVMPELEEKQVFDGEKANLLVKDLRKSFDSGMTKSYGWRVSQLEAIAKMLEEKEKEITEALYKDLGKPRLEAFITEISQAKSSCSEALKELKEWMKPEKVNTSITTYPSSAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEISPATSSLLANLIEQYLDNSTIRVVEGAIPETSALLDQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACISVDYIITRKEFAPKLVDALKEELEQFFGKDPMESKDMSRIVSPNQFARLVNLLDEDKVSDKIVLGGQRDEKKLKIAPTIILGVPEDAMIMQEEIFGPIMPIVTVDNIEDCYSIIKSKPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSTIRYPPYTPQKEKLLKALISGNIVQIILSLLGWS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00024 541 Coils Coil 92 115 - -
Gma08g00024 541 PANTHER ALDEHYDE DEHYDROGENASE 40 541 IPR012394 GO:0006081
Gma08g00024 541 Pfam Aldehyde dehydrogenase family 68 498 IPR015590 GO:0016491
Gma08g00024 541 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 40 541 - -
Gma08g00024 541 SUPERFAMILY ALDH-like 71 514 IPR016161 GO:0016491
Gma08g00024 541 PIRSF ALDH 53 537 IPR012394 GO:0006081
Gma08g00024 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Gma08g00024 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00024 Gma-Chr8 197205 202241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00024 12 541 Aldehyde Dehydrogenase Gene Family AT4G34240 63.910 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00024 K00128 - gmx:100800699 1065.83