Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02612 ATGGCAATTGCAGCGGCAAACTCATCACCCACCATGAGCCTCAGCCATAGCCAGAGCCAAGAGGATGCCACCACCAACGACAACAAGCCCGTCGTCGTCGACGATGATCACGAGCACGACATGGTCATGCCCGGCTTTCGCTTCCACCCAACTGAAGAAGAGCTCGTGGAGTTCTACCTTCGCCGTAAGGTGGAGGGAAAGCGTTTCAACGTTGAGCTTATtactttcctcgatctttatcgctatgacccttgggagcttcccgCCTTGGCAGCTATTGGTGAGAAGGAGTGGTACTTCTATGTGCCCAGAGATAGGAAGTATCGCAACGGTGATCGTCCCAATCGCGTTACTACCTCTGGGTATTGGAAGGCAACAGGAGCTGATAGGATGATCCGAACCGAGAATTTTCGCTCTATCGGCCTCAAGAAAACCCTAGTTTTCTATTCTGGGAAAGCTCCTAAAGGCATTCGAACCAGTTGGATTATGAACGAGTATCGCTTGCCGCAACATGAAACTGAACGATATCAAAAGGCTGAGATATCGCTTTGCCGTGTGTACAAGAGAGCTGGAGTCGAAGACCATCCTTCCCTCCCTCGCTGCCTCCCAACGAGGCCATCCTCATCATCAAGGGCTTCTTCTGATCACATCAATAATAATAAGTCGACGAAGCACAATGAAATGGTTCAACACCACAACATCAACATGGGATTCATGGGACAATCAAAGCCGCCAACAACTGAACACATAGTTGACAAAATTAATGAATCGGAAGCAAGCAGTGATGTCAACACAACTCTTGGACTTTCTAAATACAATGCTTACCGTGCTGCCACCATGGCGCTTCCAGTTGTTCCAATGGATGAGGAAGCCTTGATGATGATGCAGCAATCTAAGCAAGCTGCTGCTGCAGCAGCACATGTTCCAACAATCTTCTCTGCTGGGCCTTCTAGTTCCAACAACAGTGGAGTAGTGAATATGGATGATCTGAATAGGCTAATGAGTTATCAACATCAGTACTACAATGTTCAAAGCCAAAGCCATCCCAATCAGTTCTCTACTTTGCTGATGCAACCTTCACCAATAGTGTCTCTCAGCTCGCTACCAAATCCACTTCCACCCACCTTCTCTGACCGACTCTGGGACTGGAATCCAATCCCTGAGTCACCAAGTCAAGAGTACAGCAACATATCCTTCAAGTAA 1203 0.4613 MAIAAANSSPTMSLSHSQSQEDATTNDNKPVVVDDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPTRPSSSSRASSDHINNNKSTKHNEMVQHHNINMGFMGQSKPPTTEHIVDKINESEASSDVNTTLGLSKYNAYRAATMALPVVPMDEEALMMMQQSKQAAAAAAHVPTIFSAGPSSSNNSGVVNMDDLNRLMSYQHQYYNVQSQSHPNQFSTLLMQPSPIVSLSSLPNPLPPTFSDRLWDWNPIPESPSQEYSNISFK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02612 400 Pfam No apical meristem (NAM) protein 44 168 IPR003441 GO:0003677|GO:0006355
Gma07g02612 400 Gene3D NAC domain 51 192 IPR036093 GO:0003677|GO:0006355
Gma07g02612 400 MobiDBLite consensus disorder prediction 202 217 - -
Gma07g02612 400 ProSiteProfiles NAC domain profile. 42 189 IPR003441 GO:0003677|GO:0006355
Gma07g02612 400 SUPERFAMILY NAC domain 42 188 IPR036093 GO:0003677|GO:0006355
Gma07g02612 400 MobiDBLite consensus disorder prediction 1 27 - -
Gma07g02612 400 PANTHER NAC DOMAIN-CONTAINING PROTEIN 72-LIKE 22 394 - -
Gma07g02612 400 MobiDBLite consensus disorder prediction 195 224 - -
Gma07g02612 400 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 394 - -
Gma07g02612 400 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02612 Gma-Chr7 48280316 48283094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02612 41 400 NAC Transcription Factor Family AT2G02450 49.873 1.23e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma07g02612 NAM 4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02612 - - gmx:100812779 771.155