Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02608 ATGATAATGGGAGAAAAAGCTGCAATGCTACCTCTGATGCTTATTCTCAATTATATTATGTTGGTTTCGGTTGCGGTAGCACAAACAAATAATGATGATTTCACAGCTCTGGTGTCTCTTACAAGTACCTGGCAGAATAAACCTCTCAATTGGAAGGGATCACCAGATCCCTGTAATGATGGTTGGGATGGAATCAAGTGCATCAACTCACGTGTTACTTCCATAAGATTAACAGGCTTGGATATAAAAGGCGAGCTTTCAGAAGATATCGGGTTACTGTCTGAATTGGAGACGCTAGACCTCTCTCACAATAAGGGCTTAACTGGTTCACTTCCACATTCAATTGGAAATTTGACCAAGCTGTCAAACTTATTTCTTGTTGATTGTGGTTTCACTGGTCCTATTCCAGATGAAATAGGATCCCTTAAGGAGCTGGTCTTCTTATCTTTAAATTCTAACAGCTTTAGTGGAGGAATTCCGGCTTCTATTGGTAATCTACCAAAACTGAATTGGTTAGATATAGCTGACAATCAGCTTGAAGGAACCATTCCCATATCAAGTGGCAGTACACCTGGTCTTGATATGCTTCTCAGTACCAAACACTTTCATTTTGGGAAGAATAAGCTTTCTGGCACAATTCCTCCACAACTTTTTACCTCGGAAATGACTCTTATACATTTGCTTGTTGAAAACAATCAATTTGAGGGCAACATTCCTTCTACTCTTGGacttgttcagagtctacaggtggtGCGCCTTGATGACAATTTGTTAAGAGGACATGTGCCTCTTAACATCAACAATCTTACCCACGTCAATGAGCTGTACTTGCTCAACAATAAGCTGTCAGGCCCCCTGCCCAACCTTGAGGGAATGAACCAACTCAGCTACTTGGATATGAGCAACAACAGTTTTGATGAATCGGATTTTCCAGCATGGATTTCGACTCTTAAGTCTTTGTCAACACTGAAGATGGTAAACACAGGACTTCAAGGGCAGATTCCTGATTCTTTGTTTAGCCTTTCCAAGTTAAAGAACGTGATACTAAAAGACAATAAAATCAACGGTAGCCTGGACATTGGCGACACATACAGCAAGCAACTGCAATTCATTGATTTGCAGAACAATAAAATTGAAGACTTCAAGCAACAAGACATGGCACCCTCCAGTCTCAAGATAATACTTGTTCAGAACCCAGTTTGCGAGGAATCATCAGGAGTGACAAAGGGTTACTGCTCCATCCCAGAGCTGAGTGTACCATCATCGACAACAGGAAAGAATTGTGAACCTGCTACCTGCAGTTCCGGTGAGGTTTTCAGCGCCCACTGCAAATGCTCACATCCATACACGGGAACTTTAAGGTTCAGAACACCCTCTTTCTTCGACTGGGGAAATGATACCTCCCTCCAGGAACGTCTTATGCATACCTTTCAGTTTTGTAATCTACCTGTGGATTCAGTTTCCTTGAGCATTCGTGATAACTACCCATCTCTTGAATTCACCTTACAAATATTCCCTTCAAGCCGTGATTATTTCAGCCAAGGAGAGATTCTGAGAATAAGTTCTGCACTAAGCAACCTCACTATGGATGCCTTTTATTTTTATCCTGATGAATATGAACACTATGAAGAACCTACCGAGTCAAGTAAATCATCAAATGCTGGCTTCATAATTAGAGCAGCAATTGGCGGTGGTTCTTCCCTGCTTGTGTTACTACTCCTCACAGGGGGTTGTGCTTTATGGCTAAAGAAAAAGGCAGAAAAAGCAATCCAACAAAATTTCCCGTTTGGAAGCGGGGACCCGATTGACAGCAATAGTGGCATCCCTCAGTTAAAAGGGACAAGGAGATTCTTTTTTGAAGAGCTTCAGAAATACACCAACAAATTTTCGCAAGATAATGATATTGGATCCGGGGGCTATGGAAAGGTTTATCGAGGAATTCTACCCAATGGGCAACTCATAGCCATAAAACGAGCTAAAAAAGAATCTATTCATGGAGGGCTCCAGTTTAAAGCTGAGGTTGAGCTTCTATCAAGGGTCCACCATAAGAATCTTGTCAGCCTTTTGGGTTTCTGTTTTGAGCGAGGAGAACAAATTCTGGTGTATGAGTATGTTTCAAATGGAACTTTAAAGGATGCTATCTTAGGGAATTCAGTAATTAGGTTGGACTGGACTAGACGACTAAAAATAGCACTTGATATTGCAAGGGGCTTGGATTATCTTCATCAACATGCCCATCCTGCTATCATCCACAGGGACATCAAATCAAGCAACATTTTGCTGGACGAGTGTTTGAATGCTAAAGTTGCTGATTTTGGTCTTTCCAAGATGGTTGATTTTGGAAAGGATCATGTTACCACTCAAGTAAAAGGGACGATGggatacttagatccagagtattatacaagtcagcaattgacggagaagagtgatgtttatagctatggagtgttaatgttggagttgataactgcaaaaagaccaatTGAACGAGGGAAGTATATTGTGAAGGTGGTTAGGAAAGAAATTGATAAGACTAAAGATTTATATGGTCTTGAGAAGATTCTGGACCCAACCATTGGTCTAGGGTCAACATTGAAGGGTTTGGAGATGTTTGTGGATCTTGCAATGAAGTGTGTTGAAGATTCACGTCCTGACAGGCCTACAATGAATGATGTGGTGAAAGAAATTGAAAATGTGTTGCTGTTAGCTGGTTTGAACTGCTCAACTGAATCAAATTCATCTCGCTATGACGAGGTAAGTGTGCAATTCTCACCATCCCTACAGCAATGA 2793 0.3935 MIMGEKAAMLPLMLILNYIMLVSVAVAQTNNDDFTALVSLTSTWQNKPLNWKGSPDPCNDGWDGIKCINSRVTSIRLTGLDIKGELSEDIGLLSELETLDLSHNKGLTGSLPHSIGNLTKLSNLFLVDCGFTGPIPDEIGSLKELVFLSLNSNSFSGGIPASIGNLPKLNWLDIADNQLEGTIPISSGSTPGLDMLLSTKHFHFGKNKLSGTIPPQLFTSEMTLIHLLVENNQFEGNIPSTLGLVQSLQVVRLDDNLLRGHVPLNINNLTHVNELYLLNNKLSGPLPNLEGMNQLSYLDMSNNSFDESDFPAWISTLKSLSTLKMVNTGLQGQIPDSLFSLSKLKNVILKDNKINGSLDIGDTYSKQLQFIDLQNNKIEDFKQQDMAPSSLKIILVQNPVCEESSGVTKGYCSIPELSVPSSTTGKNCEPATCSSGEVFSAHCKCSHPYTGTLRFRTPSFFDWGNDTSLQERLMHTFQFCNLPVDSVSLSIRDNYPSLEFTLQIFPSSRDYFSQGEILRISSALSNLTMDAFYFYPDEYEHYEEPTESSKSSNAGFIIRAAIGGGSSLLVLLLLTGGCALWLKKKAEKAIQQNFPFGSGDPIDSNSGIPQLKGTRRFFFEELQKYTNKFSQDNDIGSGGYGKVYRGILPNGQLIAIKRAKKESIHGGLQFKAEVELLSRVHHKNLVSLLGFCFERGEQILVYEYVSNGTLKDAILGNSVIRLDWTRRLKIALDIARGLDYLHQHAHPAIIHRDIKSSNILLDECLNAKVADFGLSKMVDFGKDHVTTQVKGTMGYLDPEYYTSQQLTEKSDVYSYGVLMLELITAKRPIERGKYIVKVVRKEIDKTKDLYGLEKILDPTIGLGSTLKGLEMFVDLAMKCVEDSRPDRPTMNDVVKEIENVLLLAGLNCSTESNSSRYDEVSVQFSPSLQQ 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02608 930 SMART serkin_6 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g02608 930 Gene3D Transferase(Phosphotransferase) domain 1 705 914 - -
Gma07g02608 930 Gene3D Ribonuclease Inhibitor 289 426 IPR032675 -
Gma07g02608 930 SUPERFAMILY Protein kinase-like (PK-like) 604 896 IPR011009 -
Gma07g02608 930 ProSiteProfiles Protein kinase domain profile. 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g02608 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Gma07g02608 930 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 919 - -
Gma07g02608 930 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Gma07g02608 930 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Gma07g02608 930 CDD STKc_IRAK 635 899 - -
Gma07g02608 930 SUPERFAMILY L domain-like 66 402 - -
Gma07g02608 930 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 919 - -
Gma07g02608 930 Pfam Protein kinase domain 630 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g02608 930 ProSitePatterns Protein kinases ATP-binding region signature. 635 661 IPR017441 GO:0005524
Gma07g02608 930 Gene3D Phosphorylase Kinase; domain 1 603 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02608 Gma-Chr7 48237764 48243594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02608 12 925 Receptor kinase-like Gene Family AT5G49760 54.887 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma07g02608 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02608 - - gmx:100811702 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02608 07 48237764 48243594 Gma15g01164 15 9997009 10004263 PCT
Gma07g02608 07 48237764 48243594 Gma09g00176 09 1508115 1515256 PCT