Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02597 ATGGCAGACGTTGAGGTTGATGTGGCGGCGGCGGCGGCGGCGGCGGCTGCAGGGCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGGGTGGATCTGGACGCGCTTCTGGACATGTCCACTGACGAACTCGTGAAGATGTTCAGTGCTCGCGCACGCAGAAGGTTCCAGAGAGGTCTCACCAGAAAGCCCATGGCCTTGATTAAAAAGCTCCGCAAAGCGAAAAGGGAAGCACCAGCAGGTGAGAAGCCAGAACCAGTTCGCACCCATCTCCGCAACATGATTATTGTGCctgagatgattggtagcatcattggagtctacaatggcaagaccttcaaccaggttgaaatcaaacccgagatgattggacattatctcgctgagttctctatttcatacaaacccgtcaagCACGGTAGGCCTGGTATTGGTGCCACTCACTCTTCCAGGTTCATTCCTCTCAAGTGA 477 0.4172 MADVEVDVAAAAAAAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02597 158 Pfam Ribosomal protein S19 56 141 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 SUPERFAMILY Ribosomal protein S19 61 142 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 PRINTS Ribosomal protein S19 family signature 91 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 PRINTS Ribosomal protein S19 family signature 111 123 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 PRINTS Ribosomal protein S19 family signature 123 138 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 13 158 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 ProSitePatterns Ribosomal protein S19 signature. 111 135 IPR020934 GO:0003723
Gma07g02597 158 TIGRFAM uS19_arch: ribosomal protein uS19 25 158 IPR005713 GO:0003735|GO:0006412|GO:0015935
Gma07g02597 158 Gene3D 30s Ribosomal Protein S19; Chain A 15 158 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 10 158 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 Hamap 30S ribosomal protein S19 [rpsS]. 54 147 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma07g02597 158 PANTHER BNAA03G55820D PROTEIN 10 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02597 Gma-Chr7 48163512 48164624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02597 1 158 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 85.443 5.84e-94 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02597 K02958 - gmx:100801408 289.656