Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02568 ATGCAAACGTCTCAGAAACACCCAAGTTCAGCTGGTGTCCATTTCTATCACCAGCCTGTGCAAGGCATTTACCAAATGTTGCAAAGCAATCTATGCCATGATAGCAGCAGCCAGGGAACAAGTGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACTCTAGAATCATGCCCAGCACCCACTACTTGTTTCGTGGATTGTGATGATTCTCCTTCCTATGCCAGTGTATCATCTAAAAGGACTCCATTTTCTCCACAGGGTTCTCAGTCATGCTATTCAGATCACCAGCAGTCCTCTGACAACACCTACGGTTCGCCAATAAGCGGCTTGTCCAGTGTTGATGACGGGCATGAACTGAAGCACAAGCTTAGAGAACTGGAGATTTCATTGTTGGGGCCTGAACAATCAGACAGTTGCGGCTGCTGCGTCGTCAAGGGTGGCCTCCAGGGATCATCTCAGTTGGCTAAACATAACTGGGATCAGATTGCAGAGAACGTTGCACAATTTGACTTGAAAGGAGTCCTCAGGGTATGTGCACAGGCTGTGTCTGATGATGATGTTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGGGAAAATGGTATCAGTCTCTGGTGATCCAATCCAGAGGCTGGGTGCTTACTTATTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAATCTCATCTACAAATCCTTGAATTGTGAACAACCAACAAGCAAAGAACTAATGAGTTACATGCACATTTTGTACCAGATTTGCCCGTACTGGAAGTTTGCATACATATCTGCAAATGCTGTCATTGAAGAAGCAATGGCAAATGAGTCCAGGATTCACATAATTGATTTCCAAATTGCGCAGGGCACGCAGTGGCATTTACTTATCCAGGCTCTTGCACATAGGCCTGGGGGACCCCCCTCCCTTCGTGTGACAGGTGTTGATGATTCGCAGTCGATTCATGCACGTGGTGGAGGACTTCAGATTGTAGGAGAAAGGCTTTCAGATTTTGCCAGGTCTTGTGGAGTTCCATTTGAATTCCGCAGTGCTGCAATATCTGGCTGTGAGGTTGTACGAGGAAATATTGAAGTTCTACCCGGAGAAGCTCTGGCTGTAAGTTTTCCCTATGTTTTGCACCACATGCCTGATGAGAGTGTGAGCACTGAGAATCACAGAGATAGATTGCTGAGGTTGGTTAAGAGGTTGTCTCCCAAGGTTGTTACCATTGTTGAGCAAGAATCCAACACCAACACGTCCCCATTCTTTCACAGGTTTGTTGAGACCCTGGATTATTATACTGCAATGTTTGAATCTATAGATGTGGCTTGCCCCAGAGATGACAAGAAGCGGATTAGCGCAGAGCAGCATTGCGTGGCACGAGACATCGTCAACATGATAGCTTGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAACTTTTGGGAAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAAACAGTGTCAATTGAGTTCTTCAGTGATGGTTGCTATACAAAATCTCCTAAAGGAGTTCAGTCAAAATTATAGGCTTGAACATAGAGATGGTGCTCTTTATCTTGGTTGGATGAACAGACATATGGCCACCTCTTCTGCTTGGAGGTGA 1629 0.4598 MQTSQKHPSSAGVHFYHQPVQGIYQMLQSNLCHDSSSQGTSVSFETCKEQYFTLESCPAPTTCFVDCDDSPSYASVSSKRTPFSPQGSQSCYSDHQQSSDNTYGSPISGLSSVDDGHELKHKLRELEISLLGPEQSDSCGCCVVKGGLQGSSQLAKHNWDQIAENVAQFDLKGVLRVCAQAVSDDDVPTARGWMDNVLGKMVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLNCEQPTSKELMSYMHILYQICPYWKFAYISANAVIEEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSIHARGGGLQIVGERLSDFARSCGVPFEFRSAAISGCEVVRGNIEVLPGEALAVSFPYVLHHMPDESVSTENHRDRLLRLVKRLSPKVVTIVEQESNTNTSPFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVAIQNLLKEFSQNYRLEHRDGALYLGWMNRHMATSSAWR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02568 542 Pfam GRAS domain family 174 542 IPR005202 -
Gma07g02568 542 MobiDBLite consensus disorder prediction 76 110 - -
Gma07g02568 542 ProSiteProfiles GRAS family profile. 162 542 IPR005202 -
Gma07g02568 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Gma07g02568 542 MobiDBLite consensus disorder prediction 76 109 - -
Gma07g02568 542 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02568 Gma-Chr7 47923302 47926855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02568 1 542 GRAS Transcription Factor Family AT4G17230 59.450 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma07g02568 GRAS 2.4e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02568 - - gmx:100792931 1105.51