Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02567 ATGGTTTCTGCGGAGAAAGATTCCAATGAAACAACCAATACTCATCCAACCATCATCGGGAAGTCCATGCGAACGGTGCGCTCCAAACTATTCCAACACGACCGCGCTGCGTGCGTCTCCGACAACTTAACCGGTTCGCTAATGGAGCTCGCCTCGCGAAACAACAAATCCGTTAAATCTTCCATTACGGAGGAGCAACTCCTCGAGCTCTCTCAAGCTCTGAGCGATTTCTCCGCCTGTAGTAGCGATATCTCCGGCGAGCTCCAGAGGCTCGCCACCGTTTCCTCCTCCCAACCTCCTCCTGCTGCTCCTCACGTCGACGGCCAACCCCAACCTGAGCACGAGCCCTGCCTAGGGTTTCTCCAGAGGGAGAGCTTCTCCACCGAGATCATAGAGAGCATCTCGCCGGAGGATCTTCAGCCGACGGTCAAGATCTGCGTCGACGGACTGCACTCGCCGTCTGTGGCCGTGAAGCGATCGGCGGCGGCCAAGCTGAGGCTGTTGGCGAAGAACCGAGCCGACAACCGCGCTCTGATCGGCGAGTCCGGCGCGGTGGCTGCTCTGGTTCCGCTGCTCCGGTGCAGCGATCCGTGGACGCAAGAACACGCGGTGACGGCGTTGCTGAACCTGTCTCTTCTGGAAGAGAACAAGGCGCTTATAACGAATGCCGGTGCGGTGAAGGCGCTGATTTACGTGCTGAAAACAGGCACAGAGACTTCAAAGCAGAACGCGGCGTGCGCGCTAATGAGTTTGGCGTTGGTGGAGGAGAACAAGAGCTCAATCGGGGCTTGCGGGGCAATACCGCCGCTGGTAGCGCTGCTGCTGAGTGGGTCCCAGAGAGGGAAGAAGGACGCGCTGACGACGCTGTACAAGCTGTGTTCGGTGAGGCAGAACAAGGAGAGGGCGGTGAGTGCCGGGGCGGTGAGGCCGCTGGTGGAGCTGGTGGCGGAGGAGGGGAGCGGAATGGCGGAGAAGGCGATGGTGGTGCTGAACAGCTTGGCGGGCATTGAGGAGGGGAAGGAGGCCATTGTGGAAGAAGGTGGGATTGGTGCGCTTCTGGAGGCGATTGAGGATGGGTCGGTGAAGGGGAAGGAGTTCGCTGTTTTGACTCTTGTTCAGCTCTGTGCTCACAGCGTTGCCAACAGAGCCTTGCTTGTCAGGGAGGGAGGGATTCCGCCTCTCGTTGCTCTTTCCCAGAACGCCTCTGTTCGAGCTAAGCTCAAGGCCGAGACACTCCTTGGATATTTGAGAGAATCAAGACATGAAGCATCATGTTCAAGTCCTTAG 1287 0.5843 MVSAEKDSNETTNTHPTIIGKSMRTVRSKLFQHDRAACVSDNLTGSLMELASRNNKSVKSSITEEQLLELSQALSDFSACSSDISGELQRLATVSSSQPPPAAPHVDGQPQPEHEPCLGFLQRESFSTEIIESISPEDLQPTVKICVDGLHSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVAALVPLLRCSDPWTQEHAVTALLNLSLLEENKALITNAGAVKALIYVLKTGTETSKQNAACALMSLALVEENKSSIGACGAIPPLVALLLSGSQRGKKDALTTLYKLCSVRQNKERAVSAGAVRPLVELVAEEGSGMAEKAMVVLNSLAGIEEGKEAIVEEGGIGALLEAIEDGSVKGKEFAVLTLVQLCAHSVANRALLVREGGIPPLVALSQNASVRAKLKAETLLGYLRESRHEASCSSP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02567 428 Pfam Armadillo/beta-catenin-like repeat 174 211 IPR000225 GO:0005515
Gma07g02567 428 Pfam Armadillo/beta-catenin-like repeat 256 294 IPR000225 GO:0005515
Gma07g02567 428 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE 19 424 - -
Gma07g02567 428 MobiDBLite consensus disorder prediction 91 115 - -
Gma07g02567 428 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 265 307 IPR000225 GO:0005515
Gma07g02567 428 SMART arm_5 172 212 IPR000225 GO:0005515
Gma07g02567 428 SMART arm_5 213 253 IPR000225 GO:0005515
Gma07g02567 428 SMART arm_5 254 294 IPR000225 GO:0005515
Gma07g02567 428 SMART arm_5 336 376 IPR000225 GO:0005515
Gma07g02567 428 SMART arm_5 295 335 IPR000225 GO:0005515
Gma07g02567 428 SMART arm_5 378 418 IPR000225 GO:0005515
Gma07g02567 428 PANTHER U BOX DOMAIN-CONTAINING 19 424 - -
Gma07g02567 428 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 225 IPR000225 GO:0005515
Gma07g02567 428 SUPERFAMILY ARM repeat 140 417 IPR016024 -
Gma07g02567 428 Gene3D - 282 419 IPR011989 -
Gma07g02567 428 Gene3D - 127 281 IPR011989 -
Gma07g02567 428 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 306 348 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02567 Gma-Chr7 47913011 47915433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02567 81 421 U-box Gene Family AT2G23140 44.286 4.84e-79 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02567 - - gmx:100792402 788.875