Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02547 ATGAAGCTTGACTGCTCTAACGGCCAGGCTCCTCTCGCCGCCGATGTTTCTCCGCCGCAGGAAGACGGCTCCGAGGAGGAGATATTCGTGCCGCCGCTCAACTTCGCCATGGTCGACAACGGCATTTTTAGGGCTGGCTTTCCCGATTCCGCCAACTTCGGATTCCTGAAATCACTCCGTCTCCGTTCCGTAATGTGTTTGTGCCCTGAACCGTATCCCGAAACGACTTCGGAATTTTTGAAGGCCAACGGAATAAGGCTTTATCAGTTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAAATGATACAATTCGTGAAGCTTTGAAAGTAGCCCTCGATGTTAGGAATCACCCCCTGCTGATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGTCTTGTGGGATGCATAAGAAGATTGCAGAGGTGGTGTCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCTAGAGTGTCAGACCAGAGACACGCCGAGTACTCTTCCACTGTCACTTGCTGTCGTACGGCTTCTCACTGGGAGGACAATAATATGGGGAAATCAGGGGGTAGAAGAAAGAAGGGTGGTTCCAACGCCAACCAAGGTGGTGGCGTTGATAATTCGGGTTCAGGTGCGGCAGCCCCAACGGCTAACGGTGGGGTGGAGGTGAAGAAGGCGAATGAGCTGAAAGAAGAAGGGAATAGGAGGTTTCAGAATAAGGACTATGCGGGCGCTCTTGAGCAGTACGAGAGTGCTCTTCGTTTAACCCCCAAAACGCACCCTGACAGAGCCGTTTTCCATAGCAACAGGGCTGCGTGTTTGATGCAGATGAAGCCCATTGATTATGAGGCTGTCATTGCCGAGTGCACCATGGCGCTCCAGGTCCAGCCACGCTTTGTCCGGGCACTTCTCCGCCGGGCACGGGCGTTCGAGGCCCTTGGAAAGTATGAAATGTCTGTGCAAGATGTACAGTTCTTGCTGGCAGCTGATCCTAGCAATCGCGACGCATTGGAGATTGCCCAGAGATTGAGGACTGCATTGGGGTCGCGCCAGGAGGCCCAGCAGGACCTCCATAGTCGCCCCTCCCCAGCTGCCCTTGGTGCTTCGGCTGTCCGTGGTGCCCCTATTGCTGGATTAGGGCCTTGTTTGCCGGCTCGGCCTGTGGCAAAGAAGGGAGCGCATTCGGCAGTTGGATCTGTTGTGTCGCCCAATAATAACAAACCAGACAAGTCACAGCCAGTTTTACCAACTGAAAATGGTTCTGACACCAAGTCCCAGTTGCCAAAACTGGTATTGAAGTCTTCAAATGGTTCTGCAAAGCCACCTAACCCTAAAAAGGAAGATCACAAGGAACTGTCATCGACCATTCATGGGCAGCGTTCGGATGTTGCAATTCGGTGGAGACCATTGAAGCTTGTTTATGATCATGACATTAGGCTTGCCCAGATGCCGGTCAATTGCAATTTTAGAGGACTAAGGGATGTAGTAAGCAAAAGGTTTCCTTCGTCAAGTTCTGTTCTGATCAAGTATAAGGATTGTGATGGTGATTTGGTTACTATAACCTCTACTGATGAACTCAGACTGGCAGAGTCTAGTGTTGATAGCCATCTTGTGAAAGAACCTGGGGAAGATAAAAGTGATTCTGTAGCAATGCTGAGACTGCATATTGTTGAAGTCAGTCCAGAGCAGGAGCCACCTTTATTGGAAGAAGAGGAAGAAAAACCAGTTGAGAATGAAGGGGGCATGGGAGAAGAGAATGGATCTCATTCTTCTCTCGGCGAATCTGTCTCTGAAGTAGCTGATACCGTCAAGGTTGATAAGACTGTGAAGGATACTCCAAAGGAAAAGCCAGGAACCACAGGAGATACTGAATGCAAAGAAGTGGAGATGGATGATTGGTTGTTTGAGTTTGCTCAGCTTTTCCGCTCTCATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCTGAGGCACTTGAGGAAACAGTTACTAGTGAGGAGGCTCAGGATCTATTTGACAAGGCGGCTTCAAAGTTTCAGGAGGTGGCTGCTTTGGCTTTCTTCAACTGGGGTAATGTTCACATGTGCGCAGCTAGGAAGCGGATTCCCCTGGATGAGTCCGCTGGGCAAGTGGTAGTGGCAGAGCAGCTTCAAGTGGCTTATGAATGGGTCAAGGAAAAGTATTCTTTAGCAAGAGAGAAGTATGTGGAAGCATTGTCGATCAAACCAGACTTTTATGAGGGACTGTTGGCTCTGGGGCAGCAACAATTTGAAATGGCTAAACTTCATTGGTCTTTTGCTCTTGCTAAGAAGATAGATCTATCAGGCTGGGATTCTAAGGAGACACTTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCAACAGATATGTGGGAAAAACTGGAGGAACAGAGGGCAAAAGAGCTAAAGGACTCAAATGCAACCAAGAAAGAAGAATTATTGAGAAGAAGAAAGAAACAAGGTGCTACTGAAGGTGAGTCCTCCAGTGTTGGAGGTCAGGGTGAAATATCTGCAGAAGAAGCTGCTGAGCAAGCAGCTGTCATGAGATCACAAATTCACCTCTTCTGGGGTAATATGCTTTTCGAAAGATCCCAAGTTGAATGCAAATTAGGAATGACTGGATGGAAGGAAAACCTGGATGCTGCAACTGAACGCTTTAAGCTTGCAGGAGCTTCTGAGGCAGATGTTTCGATGGTTCTAAAGAATCATTGCTCAAATGGAGATGCAAAAGATGGAGATGATAAAAAGGTTGAGAACCCACAGCACAATAAGACTGTTAAACCAGAGATCAACAAGGCTCATCAAGTATGA 2880 0.4813 MKLDCSNGQAPLAADVSPPQEDGSEEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRSVMCLCPEPYPETTSEFLKANGIRLYQFGIDGCKEPFVNIPNDTIREALKVALDVRNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRHAEYSSTVTCCRTASHWEDNNMGKSGGRRKKGGSNANQGGGVDNSGSGAAAPTANGGVEVKKANELKEEGNRRFQNKDYAGALEQYESALRLTPKTHPDRAVFHSNRAACLMQMKPIDYEAVIAECTMALQVQPRFVRALLRRARAFEALGKYEMSVQDVQFLLAADPSNRDALEIAQRLRTALGSRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPVAKKGAHSAVGSVVSPNNNKPDKSQPVLPTENGSDTKSQLPKLVLKSSNGSAKPPNPKKEDHKELSSTIHGQRSDVAIRWRPLKLVYDHDIRLAQMPVNCNFRGLRDVVSKRFPSSSSVLIKYKDCDGDLVTITSTDELRLAESSVDSHLVKEPGEDKSDSVAMLRLHIVEVSPEQEPPLLEEEEEKPVENEGGMGEENGSHSSLGESVSEVADTVKVDKTVKDTPKEKPGTTGDTECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGQVVVAEQLQVAYEWVKEKYSLAREKYVEALSIKPDFYEGLLALGQQQFEMAKLHWSFALAKKIDLSGWDSKETLQLFDSAEEKMKAATDMWEKLEEQRAKELKDSNATKKEELLRRRKKQGATEGESSSVGGQGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMTGWKENLDAATERFKLAGASEADVSMVLKNHCSNGDAKDGDDKKVENPQHNKTVKPEINKAHQV 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02547 959 MobiDBLite consensus disorder prediction 567 630 - -
Gma07g02547 959 Gene3D Tetratricopeptide repeat domain 227 353 IPR011990 GO:0005515
Gma07g02547 959 PANTHER - 191 948 - -
Gma07g02547 959 PANTHER PROTEIN CLMP1 191 948 IPR044517 -
Gma07g02547 959 Pfam Tyrosine phosphatase family 30 172 IPR004861 -
Gma07g02547 959 MobiDBLite consensus disorder prediction 400 463 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 606 630 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 822 860 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 928 959 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 822 846 - -
Gma07g02547 959 ProSiteProfiles TPR repeat profile. 232 265 IPR019734 GO:0005515
Gma07g02547 959 SUPERFAMILY TPR-like 230 363 IPR011990 GO:0005515
Gma07g02547 959 MobiDBLite consensus disorder prediction 448 462 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 1 25 - -
Gma07g02547 959 Gene3D Protein tyrosine phosphatase superfamily 28 176 IPR029021 -
Gma07g02547 959 SUPERFAMILY CAD & PB1 domains 471 543 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 206 220 - -
Gma07g02547 959 CDD PB1 476 535 - -
Gma07g02547 959 ProSiteProfiles PB1 domain profile. 473 565 IPR000270 GO:0005515
Gma07g02547 959 CDD PFA-DSP_Siw14 29 172 - -
Gma07g02547 959 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Gma07g02547 959 Gene3D - 475 545 - -
Gma07g02547 959 Coils Coil 800 835 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 929 959 - -
Gma07g02547 959 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 173 IPR029021 -
Gma07g02547 959 MobiDBLite consensus disorder prediction 189 226 - -
Gma07g02547 959 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Gma07g02547 959 PRINTS Plant and fungal dual specificity phosphatase signature 66 79 IPR020428 GO:0016791
Gma07g02547 959 PRINTS Plant and fungal dual specificity phosphatase signature 85 99 IPR020428 GO:0016791
Gma07g02547 959 PRINTS Plant and fungal dual specificity phosphatase signature 29 46 IPR020428 GO:0016791
Gma07g02547 959 ProSiteProfiles Dual specificity protein phosphatase domain profile. 34 185 IPR020422 GO:0006470|GO:0008138
Gma07g02547 959 MobiDBLite consensus disorder prediction 404 447 - -
Gma07g02547 959 MobiDBLite consensus disorder prediction 570 584 - -
Gma07g02547 959 SMART tpr_5 306 339 IPR019734 GO:0005515
Gma07g02547 959 SMART tpr_5 270 305 IPR019734 GO:0005515
Gma07g02547 959 SMART tpr_5 232 265 IPR019734 GO:0005515
Gma07g02547 959 SMART PB1_new 473 565 IPR000270 GO:0005515
Gma07g02547 959 Pfam PB1 domain 473 564 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02547 Gma-Chr7 47763556 47771655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02547 13 172 Protein tyrosine phosphatase (PTP) family AT4G03960 68.072 2.98e-78 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02547 - - gmx:100784987 1424.45