Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02545 ATGAGTCAACTGGGTCTGATATTGCAGGAATCGCTCCGCACCGAGAGAGAAACAAGAACCATTCTGGGTTTGCTAACGGAGCAAATGGACGGCGTCGATAGAGCCCAACGGAGGAGACGGACCCTCAAAGAACGCCTCAGATTCACCGGAATCGGCTGTTGTGGAGCCACGTGGGTTTTCCGTCCAATTGTCAGGGAGGAAGGAGGAGGGGCACAAGCACATCAACAGCAAACAAATGCGGCTCAAGATCCGAATCCTAATGGATCCGAATACGTGAGCCCGAGCCCGTCGGGTACGAGTATGAATCTTGCGGCGGCGCTGGCAGCGGAGCGGCAGCTCCGGGATGGGGAGGGGGAGGGGAGGAGGGTGGTGGCGCCGGGGACGCCGTTGAGGGTGTCGTTGATGCGGCTGTTGGAGGAAACAGAGGGCGGGGATGCGGAGAAAGGAGGGGGTGGTGTGGGGAATGATTGGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGCGCGGCATTCATCCCGTGTGGGCACACCTTCTGTAGGGTGTGTTCGAGGGAGCTGTGGTTGAACAGAGGTACTTGTCCCCTTTGCAACCGTTCAATACTCGAGATTCTCGACATCTTCTGA 624 0.5785 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIGCCGATWVFRPIVREEGGGAQAHQQQTNAAQDPNPNGSEYVSPSPSGTSMNLAAALAAERQLRDGEGEGRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02545 207 MobiDBLite consensus disorder prediction 69 98 - -
Gma07g02545 207 Pfam Zinc finger, C3HC4 type (RING finger) 158 201 - -
Gma07g02545 207 CDD RING-HC 159 196 - -
Gma07g02545 207 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 207 - -
Gma07g02545 207 SUPERFAMILY RING/U-box 155 204 - -
Gma07g02545 207 SMART ring_2 159 196 IPR001841 -
Gma07g02545 207 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Gma07g02545 207 PANTHER OS01G0917900 PROTEIN 17 207 - -
Gma07g02545 207 MobiDBLite consensus disorder prediction 71 98 - -
Gma07g02545 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 206 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02545 Gma-Chr7 47743893 47744733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02545 21 207 C3H Transcription Factor Family AT4G22250 56.061 1.18e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02545 - - gmx:106799504 371.703