Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02536 ATGGAGGTTGCAGTCCCCAGACAACAACAGCCAAAAAATCAGCACAATGAGGATAAGATAGAGTTCTCAAGATACTCAAAACATTCCAGAACTGTTCagaggaaagctgacaaaatccctgagtatggtcacaaTAAACAAGAACTAAAAGGGGAAGAAACTATGAGATGTTTAAAGAAAAATAACGCTGTAGGATTGGAGACTACAATTACACAAGGAGAACAAGTAAATCAGCCTACTAAGGACAAAATCCTAAAAAGCTCGAAAAGTCTTGGAACTACAAAGACGAGAAAGGTTGAAGAAATTTATAAGTGTGATGATACAAAACTGAAGTTATGCAAGAAAGGACATGAGACACAGAAGCTTACTGTCTCAAACAAGAAAAGGAAATTTGAAGGTGATCTCTTGAATGACGATTTTGAAGATGTTTTAAAGTCAAGGACCAGGAGAAGAAGAATGAATGATGTGATGGATGTTGGACAAAATCCCCGAAAATGTCATCAGTGCATGAAAAAGAAGAGAACATTTTGTGTGTCTTGTACTAAATGCCCAAAAATGTACTGTATGCGATGTGTCAATAAATGGTACCCTGATATGTCAGTAGAAGAAATTGCTTCAAGTTGTCCATTTTGCCGGAAAAATTGCAATTGCAATGTTTGCTTGTGTTCAAGAGGGATGATTAAGACATCTAACAGGGACATCAGTGATTATGAAAAAGCTCAGTATCTGCAATATATGATTAACTTACTCCTACCATTTTTGAAACAAATTTGTCATGAACAAAGTCAAGAGGATCAGATTGAAGCTAAATTACTAGGAAAATCTTCTTTTGAGATTGAGATACCCCAAAGTCTTTGTGGTGATGTTGAACGTGTCTATTGTGACCATTGTGCTACTTCAATTATTGACTTTCATAGAAGCTGCCCCTATTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCCCGGGCTGAGCTGAAGTTCCCATATGTAAATAGGGGCTATGATTATATGCATGGTGGGGACCCTCTACCTGTGCCTTGTGATTTAGAGACATTAGAAGGTCATATTGAGCCGTCTACTGTGTGGAATGCTAAGAGTGATGGAAGCATTAGTTGTGCGCCAAAGGAGTTGGGGGGTTGCGGTAGTGCTGTATTGGAGCTGAGACGCATCCTCCCAGATGGGTGGATATCTGACTTGGAAGCCAAAGCTCGCAATATGCTGAAAATTTGGGAAATTGAGCACACAACTCTTCAGCAAAAAGAAGCAGTATCAAGCTTCACCTTTTTGAGAAAGGAAGCTATTAGAGAAGGCATAAATGACAATAACATATACTATCCAGAGTCAAGTAACACTCAAAAAGAAGGGCTGCTGCTTTTCCAAAAGCATTGGGCTAATGGTGAACCAATTATAGTCCGTGATGTCCTTAAACAGGGAACAGGTCTGAGCTGGGAGCCAATGGTAATGTGGCGAGCATTATGTGAAAATATGGTTTCAGAAATCAGTTCAAAAATGTCAGAAGTGAAAGCCATCGATTGCCTAGCTAATTGTGAGgtagaaattgatactcacacgttctttaaaggttatatagagggaagaacatacagagatctctggccagagatgctcaagctaaaagactggcccccctccgataagtttgaagatcttttgccccgccattgtgatgagtttattcgctccttgccatttcaagagtacagcgatcctcgggctggaattctcaatcttgctgtgaagttgccagcgcatgtcctaaaacctgacatgggtccaaaaacatatattgcgtatgggattaaagaagagcttggtagaggtgactctgtaacaaagcttcactgtgatatgtcagatgcgGTGAATATTTTGGCCCATACAGCTGAGGTGATATTAACTGATGAACAACACTTTATTATATCAAAGTTGAAAGAAGCACACAAGGCACAAGATGAGAGAGAACAGTGTGCCGAAGAGAGGGTTGCTGACAGCCTGGATGATCAACCTTGCAAAGACAACAAAGAACATATAGAAAATAAGGAAGTTTTTGAAGCCAAAAGCATGAAGAAACAACCTATTGAAATCAATGAAAATATCTTTCCAAATAATGTTCTTGAGGGGTTCACTTCTCCTGCTATAGAGAATGAATCAATGGAAACTggtagtgccctctgggatatctttcggagagaggattctgaaaagttagaaacatatcttagaaaacactccaaagaatttaggcatacttactgttctccagttgaacaggtcgtacatccaattcatgaccaatgtttttatttgacattggagcataagaagaagctgaaggaggagtttgGTGTAgaaccatggacttttgaacagaaacttggggaggcagtatttattcctgctggatgcccgcatcaagtcaggaatctcaagTCATGCATAAAAGTTGCTGtagactttgtgtccccagaaaatatccgtgagtgtctacgtttaactaatgagttccgccagcttcccaagaaccacaaggctagagaagataagcttgagATAAAGAAGATGATAGTTTATGCCGTTGATCAAGCTGTCAAAGACTTGAAAGATTTACTGAAGTGTTCTTGA 2670 0.2805 MEVAVPRQQQPKNQHNEDKIEFSRYSKHSRTVQRKADKIPEYGHNKQELKGEETMRCLKKNNAVGLETTITQGEQVNQPTKDKILKSSKSLGTTKTRKVEEIYKCDDTKLKLCKKGHETQKLTVSNKKRKFEGDLLNDDFEDVLKSRTRRRRMNDVMDVGQNPRKCHQCMKKKRTFCVSCTKCPKMYCMRCVNKWYPDMSVEEIASSCPFCRKNCNCNVCLCSRGMIKTSNRDISDYEKAQYLQYMINLLLPFLKQICHEQSQEDQIEAKLLGKSSFEIEIPQSLCGDVERVYCDHCATSIIDFHRSCPYCSYELCLSCCQEIRDGSITPRAELKFPYVNRGYDYMHGGDPLPVPCDLETLEGHIEPSTVWNAKSDGSISCAPKELGGCGSAVLELRRILPDGWISDLEAKARNMLKIWEIEHTTLQQKEAVSSFTFLRKEAIREGINDNNIYYPESSNTQKEGLLLFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCENMVSEISSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRDLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILAHTAEVILTDEQHFIISKLKEAHKAQDEREQCAEERVADSLDDQPCKDNKEHIENKEVFEAKSMKKQPIEINENIFPNNVLEGFTSPAIENESMETGSALWDIFRREDSEKLETYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCIKVAVDFVSPENIRECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAVDQAVKDLKDLLKCS 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02536 889 Gene3D Cupin 447 861 - -
Gma07g02536 889 SUPERFAMILY Clavaminate synthase-like 467 883 - -
Gma07g02536 889 MobiDBLite consensus disorder prediction 12 50 - -
Gma07g02536 889 CDD mRING-HC-C4C4_TRIM37_C-VIII 164 212 - -
Gma07g02536 889 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 12 888 IPR045109 GO:0032454|GO:0033169
Gma07g02536 889 Pfam JmjC domain, hydroxylase 725 835 IPR003347 -
Gma07g02536 889 ProSiteProfiles Zinc finger RING-type profile. 166 212 IPR001841 -
Gma07g02536 889 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 12 888 - -
Gma07g02536 889 ProSiteProfiles JmjC domain profile. 586 852 IPR003347 -
Gma07g02536 889 Coils Coil 656 676 - -
Gma07g02536 889 MobiDBLite consensus disorder prediction 1 50 - -
Gma07g02536 889 SMART cupin_9 567 852 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02536 Gma-Chr7 47660842 47666685 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma07g02536 JmjC 8e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02536 K15601 K21989 gmx:100797860 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02536 07 47660842 47666685 Gma07g02536 07 47660842 47666685 ECH