Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02532 ATGGCTGACTGTACAATTGGCTTTGGCAAAGATGCCACAGGAGGCAAGTATGGTGCAATATACCCAGTCACAGATCCCTCTGATGACCCTGCAAACCCAAAACCAGGCACACTCCGTTATGGTGCAATCCAAAAAGAGCCTTTCTGGATCATTTTTGACAAAGACATGGTTAAAGTGGAGATTGCTGATGGGCCTTGCATCACTATACAAGGTGTCAGTCATGCCATTATAAATGGCATTAGCATCCATGATTGTAAACCAGCCAAACCTGGCCTTGTGAGGAGTACTCCTGACCATGTTGGCCATCATCTAGGCTCTGATGGAGATGCATGTCATTAG 339 0.4602 MADCTIGFGKDATGGKYGAIYPVTDPSDDPANPKPGTLRYGAIQKEPFWIIFDKDMVKVEIADGPCITIQGVSHAIINGISIHDCKPAKPGLVRSTPDHVGHHLGSDGDACH 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02532 112 Gene3D - 1 112 IPR012334 -
Gma07g02532 112 PRINTS Pollen allergen Amb family signature 4 21 IPR018082 -
Gma07g02532 112 PRINTS Pollen allergen Amb family signature 27 52 IPR018082 -
Gma07g02532 112 PANTHER PECTATE LYASE 18-RELATED 57 110 IPR045032 GO:0030570
Gma07g02532 112 PANTHER PECTATE LYASE 18-RELATED 1 57 IPR045032 GO:0030570
Gma07g02532 112 SUPERFAMILY Pectin lyase-like 2 90 IPR011050 -
Gma07g02532 112 PANTHER PECTATE LYASE 1 57 - -
Gma07g02532 112 PANTHER PECTATE LYASE 57 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02532 Gma-Chr7 47635556 47635894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02532 1 110 Polysaccharide Lyase AT1G11920 61.538 1.69e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02532 K01728 - gmx:106799503 244.202