Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02531 ATGGCCTTAGTTCATGACCCAAATACAAAACAGGTTACCAAGAAGGAAGGGAAGGAAAAGTGGAAGAGTTGGAAATGGAGGTCTTCCAAGGATTTATTCCTAAATGGTGCTCATTTGGTACCATCTGGGTTTGGAACCTGTGCCCCAAATTATTCACCTACTCAATCTTTCACTGCTGCTCCAGCGTACATGGTGCCTGCAATGACTCTCAATGCTGGTCCCACAATTTGTGTTGTTGGGAGAGCATGTTGA 252 0.4484 MALVHDPNTKQVTKKEGKEKWKSWKWRSSKDLFLNGAHLVPSGFGTCAPNYSPTQSFTAAPAYMVPAMTLNAGPTICVVGRAC 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02531 83 PANTHER PECTATE LYASE 5 82 - -
Gma07g02531 83 Gene3D - 2 76 IPR012334 -
Gma07g02531 83 PRINTS Pollen allergen Amb family signature 24 48 IPR018082 -
Gma07g02531 83 PRINTS Pollen allergen Amb family signature 54 77 IPR018082 -
Gma07g02531 83 PANTHER PECTATE LYASE 18-RELATED 5 82 IPR045032 GO:0030570
Gma07g02531 83 MobiDBLite consensus disorder prediction 1 20 - -
Gma07g02531 83 SUPERFAMILY Pectin lyase-like 19 74 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02531 Gma-Chr7 47635128 47635499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02531 8 77 Polysaccharide Lyase AT4G22080 52.857 2.63e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02531 K01728 - gmx:100807483 142.124