Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02529 ATGTTTATGGAATGGAGTCTCACTCTTGATTCCTCTCACTCTTCCTCCTCCACCACTAACCACAACATGTTCCCCACTTTAGGATTTCCGGTCAACCTTAGCCCCTCCTCCGATCACAATCGGACGGTCCTCGGTGAAGTTGACTTCTTCTCCGGTGCTAGAAACATCTCATCATCTCACACCAACAACGATCATGGAACCCCCCTTAAGTGTGATCCCCATGTAAATACTGGTTTGCAACTTCTCACCGCTAACGCTGGAAGTGATCAGTCAACCGTGGATGATGGGGCTTCATCGGATGCTGAAGATAAGCTTGTCAAGATCACTGAGCTGGCACGATTGCAAGAGGACCTTCGGCGCATGAATGCAGAGAACCAAAAGCTGAAGGAGATGCTCAGCCATGTCAGCAGTAACTACGCGAACTTGCAAATGCATCTTGCAGCAGTACTGCAACAGCAACATAACCAACGCACTGAGAACACGGAACAAGAGGTTGTTCAAGGAAAAGCTGAGGAGAGAAAGCATGGAGGAATGGTGCCTCCTAGACAATTCCTGGATTTAGTTCCGAGTGGTACGACCGAAATAGATGATCAAGTATCGAATTCTTCTTTGGGTGAAAGGACTCGATCAACCACACCTCCCAGCTGCAATAAAAATGATGATAAGGATAAGAAAGAGACTACTGATATTCCACACTCTGGCAAATTATTGAACCATACGACGGATCCATCCACTAGTCCGGAAGCCGCTATGAGAAAAGCTCGTGTCTCAGTTCGTGCCCGATCAGAAGCACCCATGATCAGTGATGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATACTACAGATGCACCATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGAACAATTTTGACAACAACGTACGAGGGGACCCATAACCATCCACTGCCACCAGCTGCAATGGCTATGGCATCGACCACTGCAGCTGCTGCTAGCATGTTGTTGTCTGGGTCAATGACCAGTGCTGACGGAATAATGAACCCCAATTTGCTAACTAGAGCTATTCTTCCATGTTCTAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCCACAGTGACATTGGACCTCACACACAACCAAAACGCGTTTCAGAATTACCAAAGACCTCAAACCCCATTGTTCCCATCACAGCCCCAGGACTTTATCGCTGGATCCACGCCACCACAACTGCCGCAACTGATTGCACAAGCGCTCTATAATCAATCCAAATTCTCAGGCCTTCAACTTTCTCAGGATGTGGGGCCTAATAATTCCCAAGCTCCAAGACCGTTTTTGCAGCCAAGCCAACAGGTCTCGCTCACTGACACCATCAGTGCCATCACCGCCGATCCAAACTTCACGGCAGCGCTCGTCTCCGCCATCTCCTCCATCATCGGTGGTGCTAATCCAAACAATAACAGCGCCAACAACAGTAGTAGCAATCCCAATGTCATCAATAGTGCTACAATTAATCAATAG 1554 0.4833 MFMEWSLTLDSSHSSSSTTNHNMFPTLGFPVNLSPSSDHNRTVLGEVDFFSGARNISSSHTNNDHGTPLKCDPHVNTGLQLLTANAGSDQSTVDDGASSDAEDKLVKITELARLQEDLRRMNAENQKLKEMLSHVSSNYANLQMHLAAVLQQQHNQRTENTEQEVVQGKAEERKHGGMVPPRQFLDLVPSGTTEIDDQVSNSSLGERTRSTTPPSCNKNDDKDKKETTDIPHSGKLLNHTTDPSTSPEAAMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILTTTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMTSADGIMNPNLLTRAILPCSSMATLSASAPFPTVTLDLTHNQNAFQNYQRPQTPLFPSQPQDFIAGSTPPQLPQLIAQALYNQSKFSGLQLSQDVGPNNSQAPRPFLQPSQQVSLTDTISAITADPNFTAALVSAISSIIGGANPNNNSANNSSSNPNVINSATINQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02529 517 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02529 517 Gene3D WRKY domain 252 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g02529 517 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02529 517 MobiDBLite consensus disorder prediction 153 251 - -
Gma07g02529 517 MobiDBLite consensus disorder prediction 498 517 - -
Gma07g02529 517 PANTHER WRKY TRANSCRIPTION FACTOR 6 32 503 - -
Gma07g02529 517 Coils Coil 111 138 - -
Gma07g02529 517 MobiDBLite consensus disorder prediction 193 215 - -
Gma07g02529 517 MobiDBLite consensus disorder prediction 164 179 - -
Gma07g02529 517 MobiDBLite consensus disorder prediction 216 232 - -
Gma07g02529 517 Pfam WRKY DNA -binding domain 269 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02529 517 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 32 503 IPR044810 GO:0003700
Gma07g02529 517 SUPERFAMILY WRKY DNA-binding domain 260 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g02529 517 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02529 Gma-Chr7 47619028 47622264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02529 29 502 WRKY Transcription Factor Family AT1G62300 52.399 2.43e-141 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma07g02529 WRKY 4.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02529 - - gmx:100127382 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02529 07 47619028 47622264 Gma07g02529 07 47619028 47622264 ECH
Gma12g00867 12 8420446 8423957 Gma07g02529 07 47619028 47622264 ECH
Gma06g02731 06 51097118 51100456 Gma07g02529 07 47619028 47622264 ECH
Gma13g02744 13 42051388 42054331 Gma07g02529 07 47619028 47622264 ECH