Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02516 ATGGCTGACTTGTTGGAATGGTCAAAGCAAGATAAGAAACGAATGCTTCATGTCGTCTACCGTGTTGGTGACCTTGATCGCACCATCAAATTTTACACAGAATGTTTAGGAATGAAGCTTTTGAGGCAAAGAGATATCCCAGAGGAGAAATATGCTAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTTGAATTAACATATAATTATGGGGTTACCTCGTATGACATTGGCGATGGCTTTGGACATTTTGCAATTGCAACTCAGGACATTTATAAATTGGTTGAGCACATCAGGGCCAAGGGTGGAAACATCACAAGGGAACCTGGTCCAGTTCAAGGTGGAACTACTGTTATCGCCTTTGTTAAGGATCCTGATGGTTATACTTTTGGACTTATCCAAAGACCTACAGTCCATGACCCATTTTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGCATGAAGGTGGTGAGGAAGGTTGATAAGCCTGAGTACAAGTACACTATAGCTATGCTCGGGTATGGAGAGGAGCACGAGACAACTGTGTTGGAGTTGACATATAACTATGGTGTGACTGAATACTCTAAGGGAAATGCTTATGCACAGATTGCCATTGGTACTGATGATGTATATAAGAGTGCTGAGGTAGTTAACCAAGTCATAAAAGAGGTTGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCTGGCCTTAATACAAAAACCACTTCGTTTTTAGATCCAGATGGATGGAAAACTGTCTTGGTTGACAACGTTGATTTCTTGGAAGAACTGAAGTGA 843 0.4152 MADLLEWSKQDKKRMLHVVYRVGDLDRTIKFYTECLGMKLLRQRDIPEEKYANAFLGFGPEESHFVVELTYNYGVTSYDIGDGFGHFAIATQDIYKLVEHIRAKGGNITREPGPVQGGTTVIAFVKDPDGYTFGLIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVVRKVDKPEYKYTIAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVNQVIKEVGGKITRQPGPIPGLNTKTTSFLDPDGWKTVLVDNVDFLEELK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02516 280 Gene3D - 141 280 IPR029068 -
Gma07g02516 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 266 IPR004360 -
Gma07g02516 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Gma07g02516 280 Gene3D - 1 138 IPR029068 -
Gma07g02516 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Gma07g02516 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Gma07g02516 280 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 4 280 - -
Gma07g02516 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 144 IPR029068 -
Gma07g02516 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 272 IPR029068 -
Gma07g02516 280 CDD GlxI_Ni 15 136 - -
Gma07g02516 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Gma07g02516 280 PANTHER LACTOYLGLUTATHIONE LYASE 4 280 - -
Gma07g02516 280 TIGRFAM glyox_I: lactoylglutathione lyase 3 146 IPR004361 GO:0004462|GO:0046872
Gma07g02516 280 TIGRFAM glyox_I: lactoylglutathione lyase 146 274 IPR004361 GO:0004462|GO:0046872
Gma07g02516 280 ProSitePatterns Glyoxalase I signature 1. 147 168 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02516 Gma-Chr7 47547974 47551787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02516 147 271 Calmodulin-binding Proteins AT1G08110 28.477 2.70e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02516 K01759 - gmx:100793089 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02516 07 47547974 47551787 Gma07g02516 07 47547974 47551787 ECH
Gma07g02516 07 47547974 47551787 Gma06g02616 06 49477308 49481411 ECH
Gma07g02516 07 47547974 47551787 Gma15g01021 15 8613077 8618732 PCT
Gma07g02516 07 47547974 47551787 Gma09g00042 09 346705 351538 PCT