Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02498 ATGGGTTGCAACGAACCTCCCTCTCCCTACCCCGATTCTTCGTCGCTTCTCAAAGACATTTCCAACTTCACCACCCCCAGACGCCCCCCTTTCTCTCTCACCTCCGCCAAATCTCCCGCCACCCAATTCTTCACCGCCTCCAAACACAGCACCTCTTCCTCCTCCTCCTCCTTCCACCGCCGTCCCAACAAATCATCCGCCGCCGCCGCCAAGAAGCTCAAGGCCTTCCAATTGGAGCAGTCCCAGTCCTCCCGCAAGGCCCAAATCAAGAGAGAACACTCCCTCAAATCCCTCGCCAAGTCCCTCTCCGTCTGGCTCAACTTCCTCCTCCAAAACCCTACCTCCTGCGGCTGCCACCTCTCATTCTCCAATGCAGCCCCCGCTCCCGCCACCAATGGCAAGCGAGACGGCCCCCCGGGAACCTCCGTCGTCGGCGTCGATTCCACCTGGCGAACTCCCAAGCGCCAGAGGAAGACCTGGTCCACTAAGGAAAATGCGGCCACTGCGGAGGAGGTTCATGATTCCTCGTTTTCGCAACTCAGAGATTCTCTCAAGGATGTATGCAGTTTCGACGATTTGAAGCAGCGAATGAGAGTTTATCTCAGCCTCACAGTTTGTAAAGAGATCTTCCAACAAATTAATCGCGTCACCAAGACAATTGACGAAGGAAGGCTGAATATGAAGGCGCATTGCCCTATTGTAACTGATGTAGGCTTGAAGGAAAAGGCCACGAGAATTCTCATGTGTTATAATCCAATTTGGCTGCGAATTGGATTGCATATACTTTTTGGTGGTGAATCCTTGGTGTTGAATGGTGATGCTGATTCTGATCAAGATGTTGTGTTCTTGAAAATGGTCATTAACAAGCTATTTTTTTCACATGAGAATTTAGCTAAAGCCTATGCTTATAATAAGATGATTGAAGGTGTTTATCGGTTGGGTTACTATAAGAATTTGGGGAATGTGATTTTGAAGAGAATTTTGTTACTTGTGCTTGTCCTGGATAAAGCTAAATGCCAGAGTTACCTCCCACTGGAGTACGGTATTGATGGGTTGGATGGGGGTTCCCCTTTGTTATTCAAACCAGAATCCTGGATTAAATCAAGTAGTCAGCTGATTCATGAATTTCTGTCGTCTGATGTAATGCACGGAGAAGGCAATCTTCTAACACATTTAGTGATTTTAGGTTACAAATTATCTCATCAACAGGAACCTATTGTTGAGTATGATTTTAGGGTCAAAGATTTATTTGTAGATCTCCAAGATGGATTGAAATTGTGTAGAGCAATTCAGCTCTTGCAGCACAATTCTTCGATCCTCATGAAAATTGTAGTTCCCTCTGATACTCCAAAGAAAAAATTGGCAAACTGTGGTCTTGTCCTACAATATATTAGGCATGCTGGTGGATCATTACTTGATGAAGATGGCATCATGATTGTGGCAGATGATATTGTTAATGGAGACAAAGAACTTACACTTTCCTTGCTGTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTGGTTGATAAAACAAGTTTAGTTGGGGAAATTTCGAAAATTCGAGGGTTTGGCACGGATCTCATAAACAGTACGAATTCTAGTTCTATGGAATTGCTTTTGAATTGGATTCAGGTAGTTTGTAACAATTATGATTTTGCAATTGTCAATTTTCATTCCCTTGTTGATGGCAAAGCCATCTGGTGCTTACTTGATTATTACTTCCAGAAAGAACTTCATAATTCCAGTTCATTGAAGGAAGTTAATAAGAAAAGTGGCAAGGCATCAATTATGTCGGTGAATGAATATTCAGATGCACTATATAATTTTATATTATCCCAAAAGTTGACAAGGTTACTGGGGAACTTCCCAGAGGTGCTTCAAGTTAGTGAGCTACTTCAATATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATTTTGTTGGTTTTCCTAGCAAACCAATTATTTGTTAAGAAAAATTTGGATCACTTAAATTTCCATAAGCTCTTGGGTTATGACTTCCAAAGTCCAAACCATAGACATTTGAGGATGCTGCAGTGCCTTTCAAATTCTGAATCAATACAAAAGCCTGATGCTTCCGATGTGCATGGAAATGAAGATGCTGCAAGTAAATTCAAGGCCATCCAAGCTTGGTGGCAAGATATGGCTGAAAGAAACTGTATCAACAAACCTGCTGTTTCTAATTTGCAGCGATCCACTACCACTGAATGCAGCACCAACATTAGAAGAGAAAATGCTGCAATAACAATACAACTGCATTTCAGAGGATTGGTTGCACGGCGCAAGTTTCTGAAGATGGTAAATGCTGTTACCCTTTTGCAAACTGGTTTCAGAGCTTGGCTAAAAGTGAAGCAAGGGTCAGTCTGCATGATATTATCTACTGTTCAAGTCTGTGACTCTTCATGTGCAGAAATATTGAAGCAATCAGAAACATATAAGAGATATGCCATGCTTTTCATTCATAGACATTCTTTTTTGAAGTTGAAGAGGTCAGCACAGCTTATCCAGCAAGCAGTTAGGAGTTGGCTCTATCGGAGGCATCAGCAAGAATGTAGTACAAGTCCTGATCTTATGATTTCAGATATGGTGGCAGCTGCTATTACTGTTCAGAAATTTGTCCATGGTTGGCTGGCACGATCTAGATATATTCATCAGCTAGATCAGAAAGAGAAAGCTTTAAATTATTCCCAACAGAAAGTCACTTTTGATCTTCAAACAAATGCAGCAATTATCATTCAGCTTGCATGGAAAAAGTTCATATGCTGCAAGTCTACTCAGAAGCAAcacctgtttgcaactaaaattcaacaaaatttccgaaggtggttgttgagaaaaagttttttaaatcagattcaagctgtcatcaaaattcaatcttattttcgaatgtggagaagtgtaaatgcttttcagcacttcaaaattgagtataaggcagctgttgccattcaatcttacttacggggatggtttgcacgaaagaatgcttgtgtgcgtatgaatcacctgtttgcaactaaaattcaacgaaatttccgtacgtggttgttgagaaaaagttttttgaatcagattcaagctatcataaaaattcaatcatactttcgaatgcggagatgtgtaattgcttttaagcacttcaaaattgagtttaaggcagctgttgtcattcaatctttcttacggtgctggtttgcacgaaaggatgcttgtgcgcgtagaaatcacATTGTTGAAATTCAAAGGCATTGCCGTGGTTGGCTAGTGAAGCGGGACTTCTTGTTCCGAAGAGATGCTGTAGTAAAGATCCAGTGTGCCATTCAAAGCTTGAAGTGCCAGAAGGCCCTCAATTGCCAGAAAGATGCCGCTTTGGAGATTCAACGCTTTATAAGGGGGCATTTAACTCGGAATCAGCTATTAGGTTCCAAGTCACACACAGTTACTCCTATTAGTTGCATTTCAAGACCATTTGGCTTTCGTAGTTTTCAACTGGAACTATTCTTGTTTTCGGTTGTGAAATTGCAACGGTGGTGGAAGGGTCTCTTGTTGCTTAAACTAAAGAATAAATCAGCCATCATTATTCAGTCATGTACACGTGGGTGGATAGCTAGGCGAAAGGCTACTGTTTTCAGACACCATGTTGTTATCCAAGAAGATGCTGCATTGGTGATTCAACGCTATATTAGGGGGCATTTAATTCGAAATCGGAATTTAGGTGGTGCTTCTAACCTAAGTGAAGTCGTTCCTGCTGACTACATTTCAAGACCTTTTGGCTGTCGTAGTTTTCAACTGGAACTATTTTTGCTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTACAGAAATTGATGACAAAGTCTGCCATTGTTATTCAGTCTTGTACTCGTGGGTGGATAGCCAGGCGAAAGGCAACTGTTCAGAAACATCGTATTATTGTCATCCAATCCTACTGGAAAGGTTACCTTGCACGTAAAGAGCCAAAGGAACAGTTATTGGATTTGCGCTTGAGAATGCAAAAGTCTGCCAGAAATGTGGATGACAGCAAGCGTCTCATAAACCGACTCTTGGCAGCGCTTTCAGAGCTACTTAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAACATTGGACATGGCTACAGGACATTCTCAGAAATGTTGTGAAGAACTTGTGGCTGCAGGGGCTATCGACACCTTGTTGCAGCTAATTCAAACAATCAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCCGAAATCTCGCCCGCTATCCTCATCTACTACAAGTATTGATCCAAAGTCGTAGTTCTGTACAGATAATTGTCTTGGAGTTATTGAGGTTGAATAAAAACGAGGGCTACTTCGTTGCTTCTGAACTTTTGAAGAAGATATGTTCAACTCGTATAGGCATTGAGAGGATATTCAAGTCCCCTGCCCTGCTAAAACGATTGCACGGTCTTGTTGAGGACCTTACACGGAAGGGAATTTACGAGAAAAGAAATCCTAGGGCTCCTAGCCTGGCTATCAGAAAAGACAGAGAGAGAAGATTGAAGGAGGCTGCTGAGATTCTGAAGCTGATAACAACGCCTGATTTTTTTTCATCAAGTTCTGATGTGAAATTGTAG 4680 0.3829 MGCNEPPSPYPDSSSLLKDISNFTTPRRPPFSLTSAKSPATQFFTASKHSTSSSSSSFHRRPNKSSAAAAKKLKAFQLEQSQSSRKAQIKREHSLKSLAKSLSVWLNFLLQNPTSCGCHLSFSNAAPAPATNGKRDGPPGTSVVGVDSTWRTPKRQRKTWSTKENAATAEEVHDSSFSQLRDSLKDVCSFDDLKQRMRVYLSLTVCKEIFQQINRVTKTIDEGRLNMKAHCPIVTDVGLKEKATRILMCYNPIWLRIGLHILFGGESLVLNGDADSDQDVVFLKMVINKLFFSHENLAKAYAYNKMIEGVYRLGYYKNLGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHEFLSSDVMHGEGNLLTHLVILGYKLSHQQEPIVEYDFRVKDLFVDLQDGLKLCRAIQLLQHNSSILMKIVVPSDTPKKKLANCGLVLQYIRHAGGSLLDEDGIMIVADDIVNGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIRGFGTDLINSTNSSSMELLLNWIQVVCNNYDFAIVNFHSLVDGKAIWCLLDYYFQKELHNSSSLKEVNKKSGKASIMSVNEYSDALYNFILSQKLTRLLGNFPEVLQVSELLQYNGACSDRSVVILLVFLANQLFVKKNLDHLNFHKLLGYDFQSPNHRHLRMLQCLSNSESIQKPDASDVHGNEDAASKFKAIQAWWQDMAERNCINKPAVSNLQRSTTTECSTNIRRENAAITIQLHFRGLVARRKFLKMVNAVTLLQTGFRAWLKVKQGSVCMILSTVQVCDSSCAEILKQSETYKRYAMLFIHRHSFLKLKRSAQLIQQAVRSWLYRRHQQECSTSPDLMISDMVAAAITVQKFVHGWLARSRYIHQLDQKEKALNYSQQKVTFDLQTNAAIIIQLAWKKFICCKSTQKQHLFATKIQQNFRRWLLRKSFLNQIQAVIKIQSYFRMWRSVNAFQHFKIEYKAAVAIQSYLRGWFARKNACVRMNHLFATKIQRNFRTWLLRKSFLNQIQAIIKIQSYFRMRRCVIAFKHFKIEFKAAVVIQSFLRCWFARKDACARRNHIVEIQRHCRGWLVKRDFLFRRDAVVKIQCAIQSLKCQKALNCQKDAALEIQRFIRGHLTRNQLLGSKSHTVTPISCISRPFGFRSFQLELFLFSVVKLQRWWKGLLLLKLKNKSAIIIQSCTRGWIARRKATVFRHHVVIQEDAALVIQRYIRGHLIRNRNLGGASNLSEVVPADYISRPFGCRSFQLELFLLSVVKLQRWWKGLLLQKLMTKSAIVIQSCTRGWIARRKATVQKHRIIVIQSYWKGYLARKEPKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSTLDMATGHSQKCCEELVAAGAIDTLLQLIQTISRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVLELLRLNKNEGYFVASELLKKICSTRIGIERIFKSPALLKRLHGLVEDLTRKGIYEKRNPRAPSLAIRKDRERRLKEAAEILKLITTPDFFSSSSDVKL 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02498 1559 SUPERFAMILY ARM repeat 1364 1509 IPR016024 -
Gma07g02498 1559 SMART arm_5 1396 1441 IPR000225 GO:0005515
Gma07g02498 1559 Gene3D - 398 504 IPR036872 -
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1127 1156 IPR000048 GO:0005515
Gma07g02498 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 943 IPR027417 -
Gma07g02498 1559 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1407 1440 IPR000225 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 750 778 IPR000048 GO:0005515
Gma07g02498 1559 PANTHER UNCHARACTERIZED 7 1003 - -
Gma07g02498 1559 MobiDBLite consensus disorder prediction 128 147 - -
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1227 1244 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1085 1101 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1060 1077 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1129 1147 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1197 1214 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 871 889 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 752 770 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 986 1003 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1296 1314 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1321 1337 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 939 955 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 960 974 IPR000048 GO:0005515
Gma07g02498 1559 Pfam IQ calmodulin-binding motif 1013 1029 IPR000048 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1013 1038 IPR000048 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1058 1087 IPR000048 GO:0005515
Gma07g02498 1559 Pfam Armadillo/beta-catenin-like repeat 1396 1441 IPR000225 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1225 1254 IPR000048 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1295 1322 IPR000048 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1318 1346 IPR000048 GO:0005515
Gma07g02498 1559 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1006 1245 - -
Gma07g02498 1559 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1247 1546 - -
Gma07g02498 1559 ProSiteProfiles Calponin homology (CH) domain profile. 382 504 IPR001715 GO:0005515
Gma07g02498 1559 Gene3D - 1193 1249 - -
Gma07g02498 1559 Gene3D - 936 984 - -
Gma07g02498 1559 Gene3D - 1106 1156 - -
Gma07g02498 1559 Gene3D - 869 935 - -
Gma07g02498 1559 Gene3D - 749 794 - -
Gma07g02498 1559 Gene3D - 1293 1342 - -
Gma07g02498 1559 Gene3D - 1059 1105 - -
Gma07g02498 1559 Gene3D - 1009 1058 - -
Gma07g02498 1559 MobiDBLite consensus disorder prediction 1 69 - -
Gma07g02498 1559 SUPERFAMILY Calponin-homology domain, CH-domain 329 587 IPR036872 -
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1195 1222 IPR000048 GO:0005515
Gma07g02498 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 1003 IPR027417 -
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 935 964 IPR000048 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 1081 1110 IPR000048 GO:0005515
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 984 1013 IPR000048 GO:0005515
Gma07g02498 1559 Pfam Calponin homology (CH) domain 412 502 IPR001715 GO:0005515
Gma07g02498 1559 PANTHER UNCHARACTERIZED 1006 1245 - -
Gma07g02498 1559 PANTHER UNCHARACTERIZED 1247 1546 - -
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 869 898 IPR000048 GO:0005515
Gma07g02498 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1277 1341 IPR027417 -
Gma07g02498 1559 Gene3D - 529 658 IPR036872 -
Gma07g02498 1559 MobiDBLite consensus disorder prediction 8 63 - -
Gma07g02498 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1077 IPR027417 -
Gma07g02498 1559 ProSiteProfiles IQ motif profile. 958 987 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 772 794 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1080 1102 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 834 856 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 983 1005 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1008 1030 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1294 1316 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1317 1339 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 749 771 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1194 1216 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1031 1053 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 957 979 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1126 1148 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 934 956 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1224 1246 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 868 890 IPR000048 GO:0005515
Gma07g02498 1559 SMART iq_5 1057 1079 IPR000048 GO:0005515
Gma07g02498 1559 Gene3D - 1346 1516 IPR011989 -
Gma07g02498 1559 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 7 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02498 Gma-Chr7 47396987 47407228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02498 970 1101 Myosins gene family AT4G33200 33.333 5.45e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02498 K16743 - gmx:100788871 3031.89