Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02469 ATGGCACAACAAGTTCAAGTATTCACTACATGTTATTGTCCACCACCTCAATACGAATACCTTCGCCGAATCGGAATTTCGAAGCAATTAAAGTGTGCTACTATTCCTTCACTATCAGTTTCCGCCTCTTCTGTTCTTCGTAACGCGTCGTTTTGCTGCACCTCTTCTGTCCACTGCAATTTACCTTCTTCACCCAAAATCTTCGTCAAAGGGCTTCCTCTCTCAACCTCTGAAGGACGTCTGATGAAggtgttttcagagtttggtgacgttactctagTCCAGCTTCCAATAGATAGAGAGTCTGGGCAGTCTTTAGGATTTGCATATATTTGGTTTGTCAAGGAAGAGTCTGCCCAATTGGCTGTGCAAGAGATGAATGGAAAGTTTTTTGATGGCAGGTTTATTTATGTTACAATTGCAAAGCCTGGATCATCAAAAATTGGTGATCAAGAACAAGCAGCAGTTCTAGTCCCTCCTGGGGGGTGGGGGGAAGTGCAAGGTTTTAGCCTTCTATCTTTCGGTGGCTGCTTTGATAGCTGTCGCGACCTCCCTCAAGGCACCGGATATGGGACAAGGATATGGTACCTCAGTGATCGACCTGTGGAGCTACAAGTAAGGATGGTTAAGCAGCAGTATATTAGCCTCAAGGATCCGAGGGATTCTTCTGAGATGAAAATCTGCTGGGATCATGAGAGGTTCTATCTCAGTTCGTAA 717 0.4296 MAQQVQVFTTCYCPPPQYEYLRRIGISKQLKCATIPSLSVSASSVLRNASFCCTSSVHCNLPSSPKIFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLAVQEMNGKFFDGRFIYVTIAKPGSSKIGDQEQAAVLVPPGGWGEVQGFSLLSFGGCFDSCRDLPQGTGYGTRIWYLSDRPVELQVRMVKQQYISLKDPRDSSEMKICWDHERFYLSS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02469 238 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 46 147 - -
Gma07g02469 238 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 136 IPR000504 GO:0003723
Gma07g02469 238 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 46 147 - -
Gma07g02469 238 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 143 IPR000504 GO:0003723
Gma07g02469 238 Gene3D - 56 162 IPR012677 -
Gma07g02469 238 SMART rrm1_1 66 139 IPR000504 GO:0003723
Gma07g02469 238 SUPERFAMILY RNA-binding domain, RBD 61 149 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02469 Gma-Chr7 47155161 47158584 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02469 66 207 Eukaryotic Initiation Factors Gene Family AT4G34110 25.556 1.06e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02469 - - gmx:100791917 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02469 07 47155161 47158584 Gma07g02469 07 47155161 47158584 ECH