Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02452 ATGCTTTCGATGCCGTCGGGGAGGCCCAGTTCTTGGGAGGGGAAGGGAACGGTGTGGAGGCGGAGGGAGGGGATGGACGGGGGTGGTGATGATAGTGACGTGGTGGCCGCGAGAGGCGAAGAGCGTGACTATGTCGCAGAGAGGGATCATGTGACCTGCTGTTGGCCCTTTCCCCCAGCAAATCGGTGGTGCCCTCCCTCCCTCCCTGGTCCTAGCCACTATGTTACCCACTTTCCCTCAAGCCTCTCTCCCATGGCCTCCTCTCCCCCTCCTCCCGATCCCCCCACTGCCGTCCCCCTCGCCCTCGTCCCCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCCCCATCCCCGCTCCACCCTCCTCCCGCCGCCTCCCTCCTCCCTGCTGGTCCCCCGATGAAACCCTCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTCGCCGACGCCATCGCAAGCCGCTGCCCCAACGCCTCCCCTCCCAAAACCCCCATCCAGTGCCGCCACAAAATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACGCTCTCGCTCCCTCCCCGTTTCGCGATTCAACTCCTCCTGGGTCCACTTCAAGCTCATGGACTCCATGGAGAAAGGTCCCTCCCCTGTTAAACCCGAAAACGTTTCCGATAATAGTGATAACGATAACGAGGATGATGACGATGATCAAGATCTGTACCAGGAGATCAACCACAACGGCCACATCAGGAGCTTGAACAAGATGTATAGGAATGGCTTTCCGGGTTCTGGTGCCGGTTCCGGTGCTGGTGGGTTTAGGATTCGAATTCCTACTGGGTTGGGTACGGTGCAGCCTGGATCTGGCTCCAAGGTGTTTGGGAATCAGAAATTCAGCCCCAATTTGAATCAAAACCCTAACCCTAATCTCGGGAATAAGAGGGAGAGGGACCCGGTGGGGGAGTTAGTGGCTGCGATTAAGGTTTTGGGAGATGGGTTTGTGAGAACGGAACAGATGAAGATGGAGATGGCGAGGGAGATTGAGACCATGCGGATGGAGATGGAGATGAAGCGCACTGAGATGATTCTAGAATCGCAACAGCGGATTGTGGAGGCATTTGCCAAGGCCATTTCGGAAAAGAAGAAGAAGGCCAAGACTGTGTCGTCGCCACAACAGCCTTAA 1611 0.4289 MLSMPSGRPSSWEGKGTVWRRREGMDGGGDDSDVVAARGEERDYVAERDHVTCCWPFPPANRWCPPSLPGPSHYVTHFPSSLSPMASSPPPPDPPTAVPLALVPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIPAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAIASRCPNASPPKTPIQCRHKMEKLRKRYRTEIQRSRSLPVSRFNSSWVHFKLMDSMEKGPSPVKPENVSDNSDNDNEDDDDDQDLYQEINHNGHIRSLNKMYRNGFPGSGAGSGAGGFRIRIPTGLGTVQPGSGSKVFGNQKFSPNLNQNPNPNLGNKRERDPVGELVAAIKVLGDGFVRTEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAISEKKKKAKTVSSPQQP 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02452 536 MobiDBLite consensus disorder prediction 354 459 - -
Gma07g02452 536 Pfam Myb/SANT-like DNA-binding domain 261 354 IPR044822 -
Gma07g02452 536 Coils Coil 105 105 - -
Gma07g02452 536 ProSiteProfiles Myb-like domain profile. 263 323 IPR001005 -
Gma07g02452 536 MobiDBLite consensus disorder prediction 426 454 - -
Gma07g02452 536 MobiDBLite consensus disorder prediction 84 98 - -
Gma07g02452 536 SMART 118neu2 270 359 IPR006578 -
Gma07g02452 536 Gene3D - 263 328 - -
Gma07g02452 536 PANTHER TRANSCRIPTION FACTOR 246 532 - -
Gma07g02452 536 MobiDBLite consensus disorder prediction 15 34 - -
Gma07g02452 536 MobiDBLite consensus disorder prediction 79 98 - -
Gma07g02452 536 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 246 532 IPR044823 -
Gma07g02452 536 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02452 Gma-Chr7 47024944 47029214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02452 262 354 Trihelix Transcription Factor Family AT3G14180 38.710 3.20e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma07g02452 Myb_DNA-bind_4 2.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02452 - - gmx:121175207 493.041