Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02422 ATGCAAGGCCACACTGAAACTAACTCTATCATGGCACCACTCTCTCAAATCCCACCTTCTTCTTCTTCTCTTCACCTTTCAACCGATGCTGAAACGGGTAACACAACCACCCCCAGAAAGCGTGTTAAGAAAATGGACCACACCAATTGCGAGAGCCTCAACGTGGAACGTGAAAGAAGGTCGAAGATGACTCAAATGTTCACTCAGCTTCAAACCACTGTCCCTGGTGTCTTACCTCAGGCTACAAGGGAAGTGATTATAAACGAGACAATTAAGTACATTAAGGAGCTTGAGAAGAAGAAGCAAAAGCTGGAGGAGTTGAAGGAGTCAATGAAAGGAGTAGAAGGGTCGATATTGCTTGCATGTGGTAACAACATGAATTGCTCCGTCACGGTTACTGTCTCTGCTAATGTTGCATTCTTTGGTATTCAATCCCTGCCTCGACCCGGTTTGGTCACGGTAATCATGAAGGTGTTCTGCAAGCACCGAGCTGAGGTTTTGGCCGCAAATGTCTCAGTTAATAATGGGAAATTCATATTGGCAATCACTGCGACGGTGCAAAATGTTGTCGTTGAAAATATCAAAAGAGAAATAATGAGTTTGTAG 606 0.4422 MQGHTETNSIMAPLSQIPPSSSSLHLSTDAETGNTTTPRKRVKKMDHTNCESLNVERERRSKMTQMFTQLQTTVPGVLPQATREVIINETIKYIKELEKKKQKLEELKESMKGVEGSILLACGNNMNCSVTVTVSANVAFFGIQSLPRPGLVTVIMKVFCKHRAEVLAANVSVNNGKFILAITATVQNVVVENIKREIMSL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02422 201 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
Gma07g02422 201 MobiDBLite consensus disorder prediction 1 35 - -
Gma07g02422 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 97 IPR011598 GO:0046983
Gma07g02422 201 Coils Coil 87 117 - -
Gma07g02422 201 Gene3D - 34 119 IPR036638 GO:0046983
Gma07g02422 201 SMART finulus 53 103 IPR011598 GO:0046983
Gma07g02422 201 MobiDBLite consensus disorder prediction 1 49 - -
Gma07g02422 201 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 8 200 - -
Gma07g02422 201 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 200 - -
Gma07g02422 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 112 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02422 Gma-Chr7 46790860 46791651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02422 18 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 34.737 5.72e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g02422 HLH 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02422 - - gmx:102670256 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02422 07 46790860 46791651 Gma07g02422 07 46790860 46791651 ECH