Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02411 ATGTCAACCTCGAGAACCTCATCAGATACACCCTTCAAAGGATATGATCCTAGCCAAACTCAAATGTGTCTCTCTCTCCTCCAACGCAACACTTCTCCTTGTGGTGAGAGGAGGGGCAGAAGGAAGCAAGCAGAACCAGGGAGGTTCCTTGGTGTGAGGAGGCGCCCTTGGGGTCGATATGCTGCTGAAATTAGAGACCCCACAACCAAAGAGAGGCATTGGCTTGGCACATTTGACACTGCTCAAGAAGCAGCTCTTGCTTATGACAGAGCTGCTCTGTCCATGAAAGGAAGCCAAGCTAGAACCAACTTTGTTTACTCTGATAACATCAACTTCCACACTCTCCAGCTTTCTCCTATGAATGTTCAAGTTCAACCTCTCTTGCCAGCTTCACAGTTCCTCACTACCACCACCACTCAGACCAACCAAAATAGCCACTTTCAGGTTATTCACAGTACTCCAAACTGTGGAAACCCCTCCCCATTGAACAATGACATGTGTGTTGAAACCACATATGGGTCAGCTCAGGATGATAATTTCTTCTTTTCCAGTGATTCTAACTCGGGCTATCTCGAATGCATAGTTCCTGATGATTGCTTCAGACCTGCTTCATCCAGTTCCAACAGTTCAAACTCCAGAAAGAGCAACGTGAGTGATCAAAAGGCTAACACAAGCTCCATGGAGAGTACTAATCACCATCATCATCAGTACTCACATGTTGACATGACTTCATTCTCTCAAGAAGGCATTGAAATGGCACCAAGGGCATCTTATAACTTTTCAGATTTTTGTTATCAAAGTGAAGTGAGTCAAGGATCATGGGATGATCAGCAGTCATGGGATTGGAATAGCAGTGAACTTTCAGCTATATTTAAGAACCCAATGAGGGTGGAAAATGGGTGCATGGATGCATTATGCCCCATAAATGATAGTCCTAGTTCAAGCTATGGGCTAATGAATGAGGCTGCTTCTTCTTCTACAACCTGTTCTCCGTCACTTCCACCCTTTGGGGACGTAGACTTGGGATACCCACTCTTCTGA 1041 0.4524 MSTSRTSSDTPFKGYDPSQTQMCLSLLQRNTSPCGERRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYSDNINFHTLQLSPMNVQVQPLLPASQFLTTTTTQTNQNSHFQVIHSTPNCGNPSPLNNDMCVETTYGSAQDDNFFFSSDSNSGYLECIVPDDCFRPASSSSNSSNSRKSNVSDQKANTSSMESTNHHHHQYSHVDMTSFSQEGIEMAPRASYNFSDFCYQSEVSQGSWDDQQSWDWNSSELSAIFKNPMRVENGCMDALCPINDSPSSSYGLMNEAASSSTTCSPSLPPFGDVDLGYPLF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02411 346 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Gma07g02411 346 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Gma07g02411 346 Pfam AP2 domain 51 97 IPR001471 GO:0003700|GO:0006355
Gma07g02411 346 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 346 - -
Gma07g02411 346 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Gma07g02411 346 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Gma07g02411 346 MobiDBLite consensus disorder prediction 204 235 - -
Gma07g02411 346 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Gma07g02411 346 MobiDBLite consensus disorder prediction 204 231 - -
Gma07g02411 346 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 346 - -
Gma07g02411 346 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
Gma07g02411 346 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02411 Gma-Chr7 46710467 46711507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02411 1 226 AP2-EREBP Transcription Factor Family AT5G18560 44.086 7.88e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma07g02411 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02411 - - gmx:100812047 693.73