Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02403 ATGGTGGATAACGTTGGAGGCAGTTCCTCTAATGCCGAAAATAGTGGCATCAGGGAACAGGACCGGTTGTTGCCAATAGCCAATGTTGGGAGGATCATGAAGCAGATTCTACCTCCGAACGCAAAAATCTCCAAGGAATCGAAGGAAACAATGCAAGAGTGCGTGTCGGAGTTCATAAGCTTTGTAACGAGCGAGGCGTCAGAGAAGTGCAGGAAGGAAAGGAGGAAGACTGTGAACGGGGATGACATATGCTGGGCCTTGGGTTCGCTTGGTTTTGACGACTATGCAGAGCCATTGAGAAGGTATTTGCAAAGATATAGAGAACTAGAAGTCGATAGAGGAAATAGCCCCCCCAAAAGAGAATAA 366 0.4727 MVDNVGGSSSNAENSGIREQDRLLPIANVGRIMKQILPPNAKISKESKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALGSLGFDDYAEPLRRYLQRYRELEVDRGNSPPKRE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02403 121 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Gma07g02403 121 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Gma07g02403 121 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Gma07g02403 121 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Gma07g02403 121 ProSitePatterns NF-YB/HAP3 subunit signature. 54 70 IPR003956 GO:0005634|GO:0006355|GO:0043565
Gma07g02403 121 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 116 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma07g02403 121 SUPERFAMILY Histone-fold 20 117 IPR009072 GO:0046982
Gma07g02403 121 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 116 - -
Gma07g02403 121 Gene3D Histone, subunit A 10 121 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02403 Gma-Chr7 46613965 46614572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02403 17 119 CCAAT-HAP3 Transcription Factor Family AT2G47810 74.757 2.90e-56 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma07g02403 CBFD_NFYB_HMF 3.4e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02403 K08065 - gmx:100786046 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02403 07 46613965 46614572 Gma07g02403 07 46613965 46614572 ECH