Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02393 atgagggttcatatcacttaCCTTAGCTGCAGTCCTTCTACTACAAGTGATATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTAAGGAAGTCCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATATATGACGGCTTTAATGGAAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTACTTTAACAAGTTAATTTGGGAATTGGAGCCGGGTTCCGTCAAAGCTTACGATGATGGATGCTTGGGTGGATCCCTGCAATATAAGTTGGATGATAGTCTTATTTATCACGAGGATCAATCTCTGTCAAGATTTAAGGGAATAAACGATTCTAATCATGGTTGTTTTGCAAAGTGTAGTCCATCTACTAAGTCAGAAGTATCATGTGATTCATTTTCATATGGGGTACTTGATATCCTTGAACGTTCTATTAGTCAGGCTGAGAATGACTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCACGGCAATGATTTGTATACCCTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCACTACAGTTGATCGAATGGATAAGAGAGAGAGACTCGAGGCTATACAGCTTACAGATAATCATACTGTTGATAATGAAGTTGAAAGAGCTAGACTTCTGGCTGATCATCCTGATGATCCCAAGATCGTTATAGGAGGAAAAGTGAAAGGTAAATTGAAGGTTACTCGAGCTTTTGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGGGATCTTAAAAGCCCACCATACATATCCACGCAACCATCATTGAATGTCCATAGAATTTCAAATTCCGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTGGAGTCTTATATCTTGAGCAATCCTTTTGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCTGCCGGTCTTAGCATGGAAGAGTTGATGAATATTCCAGCTGGGAGGAGAAGGAAGTACCATGACGACGTGACCGTAATTGTAATCATGCTTGGGATGAATCAGCGTACTTCAAAGGCATCAACTTGCATTTAA 1281 0.3997 MRVHITYLSCSPSTTSDILEYDSCTLKSMSDPSRSEGFLNAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIWELEPGSVKAYDDGCLGGSLQYKLDDSLIYHEDQSLSRFKGINDSNHGCFAKCSPSTKSEVSCDSFSYGVLDILERSISQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCTTVDRMDKRERLEAIQLTDNHTVDNEVERARLLADHPDDPKIVIGGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYISTQPSLNVHRISNSDQFVIVGSDGLFDFFSNDEAVKLVESYILSNPFGDPAKFLIEQLVARAADSAGLSMEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02393 426 Gene3D - 8 422 IPR036457 -
Gma07g02393 426 Pfam Protein phosphatase 2C 184 377 IPR001932 -
Gma07g02393 426 SUPERFAMILY PP2C-like 52 414 IPR036457 -
Gma07g02393 426 CDD PP2Cc 51 411 IPR001932 -
Gma07g02393 426 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 4 425 - -
Gma07g02393 426 PANTHER PROTEIN PHOSPHATASE 2C 4 425 IPR015655 GO:0004722|GO:0006470
Gma07g02393 426 SMART PP2C_4 29 411 IPR001932 -
Gma07g02393 426 ProSiteProfiles PPM-type phosphatase domain profile. 38 413 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02393 Gma-Chr7 46532502 46536173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02393 26 426 PP2C-type Phosphatase Gene Family AT3G16560 62.283 9.80e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02393 - - gmx:100808304 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02393 07 46532502 46536173 Gma07g02393 07 46532502 46536173 ECH