Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02363 ATGCGAGATTATTTTCCAATCCACCGTAGCAGATCTCATTCATTCTTTTCTTTTCTTTCCATTCAATCACGCCCTCTCTTCCCTTCCCTTGGCGCAATGAATTCCAACTTCAATTTCGATTTCGATCTCGGCATCGGATCCAACCGTCCCAAATCCCTTAACGACCAGAAAAACCCCAAACCAACTCCCTATTCTTCCTATTCCACCACCACCACCGCTTCCTATTCCTCCTCCCAACCCAATAAACAACCTGCATGGACCCACCAACCCTCCCCCACTCAGACCACCGCCTTGCCCGGTGGCCCCCCCTCCATGGTCGGAGACATCTTCGGCAAGAGCTGGGGAACCCCTCAACCTTCTTCTGCTTCCAAAAACATCGGGATCGTCAATAAGAACCCTAACCTTTTCGGAGATTTGGTAAGTTCTGCTTTGGGCCAGGGTTCCAAGACCAACGTTCCTCTTAAAAATGCTCCCACTCCCGCGCCCAATAAATCCACCTTTTCAATGGGAAATATGGCTGATTCTTTGCCCAAAACTGGTTCCACGCCGCAGAGCAGTTCTACTTGGGCATCGTCCTCTGGGGGTTTTAATGTGAGTGCCAATAAAACCACTCTCAATCTTGGGGGTCCTTCATTGCGAAACATGGGTACTGGAATTGGAACCAATTCTAATAACAAGGATCCCTTTAGTTCTTTGTCTGGTATTGGATCCAAGCAATCTGCTACTCTTAATTCAGCTCCCAAAGGACCAAAGGTTGATTTGGGGGACGATGGTTTTGGTGATTTTCAAAATGCTTCCAAACCCAGCTCCACTGCGTTTCCATTCACTGCTTCTCCTGGAATTGATATCAATTTTACTGGATCAGGTGATAGTGGTGATCCAATGGACATGTTTTTTACGGCAACTTCCTCCTCGGCCTCTGGTGGAGGTGCTGCTGCGGCCTCTGATGGATTTGGAACACAGGATGATTGGGGTTTGGATTCGGAGTTTGGTGGGGGAGGCCATGATGTAGGTGGCACCACTACTGAGCTTGAGGGGCTGCCTCCTCCTCCTTCCGGGGTGTCAGGTTCCACTGCCAAAGGCAAAGGGATGGACAATTACAAGCAGGGGCAGTTTGCCGATGCTATTAAGTGGCTTTCGTGGGCCGTCATCCTTCTACAGAAAGCTGGGGATAGTGCGGCCACTGTCGAGGTTTTGTCGTGCAGGGCTTCGTGTTACAAAGAAGTTGGGGAGTATAAAAAGGCAGTTGCAGATTGTACAAAGGTTCTTGAAAATGATGAAACCAATGTATCTGTCCTGGTACAGCGTGCTCTGTTATATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAAGACCTTAGGACTGTGCTGAAGATTGATCCCGGTAATAGAATTGCTAGAAGCACTGTTCACCGGTTGGCTAAGATGGCTGATTAG 1437 0.4864 MRDYFPIHRSRSHSFFSFLSIQSRPLFPSLGAMNSNFNFDFDLGIGSNRPKSLNDQKNPKPTPYSSYSTTTTASYSSSQPNKQPAWTHQPSPTQTTALPGGPPSMVGDIFGKSWGTPQPSSASKNIGIVNKNPNLFGDLVSSALGQGSKTNVPLKNAPTPAPNKSTFSMGNMADSLPKTGSTPQSSSTWASSSGGFNVSANKTTLNLGGPSLRNMGTGIGTNSNNKDPFSSLSGIGSKQSATLNSAPKGPKVDLGDDGFGDFQNASKPSSTAFPFTASPGIDINFTGSGDSGDPMDMFFTATSSSASGGGAAAASDGFGTQDDWGLDSEFGGGGHDVGGTTTELEGLPPPPSGVSGSTAKGKGMDNYKQGQFADAIKWLSWAVILLQKAGDSAATVEVLSCRASCYKEVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPGNRIARSTVHRLAKMAD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02363 478 MobiDBLite consensus disorder prediction 330 360 - -
Gma07g02363 478 SMART tpr_5 396 429 IPR019734 GO:0005515
Gma07g02363 478 SMART tpr_5 430 463 IPR019734 GO:0005515
Gma07g02363 478 SMART tpr_5 356 389 IPR019734 GO:0005515
Gma07g02363 478 MobiDBLite consensus disorder prediction 50 126 - -
Gma07g02363 478 PANTHER OS03G0340700 PROTEIN 36 290 - -
Gma07g02363 478 PANTHER OS03G0340700 PROTEIN 289 478 - -
Gma07g02363 478 MobiDBLite consensus disorder prediction 50 100 - -
Gma07g02363 478 Gene3D Tetratricopeptide repeat domain 356 477 IPR011990 GO:0005515
Gma07g02363 478 SUPERFAMILY TPR-like 360 468 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02363 Gma-Chr7 46318775 46322191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02363 355 473 Calmodulin-binding Proteins AT3G25230 29.457 1.83e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02363 - - gmx:100799789 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02363 07 46318775 46322191 Gma07g02363 07 46318775 46322191 ECH