Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02362 ATGTGTGGGGGTGCTATAATTTCTGATTTCATAGACGTGAATTTGAACAGTGGTCGGAAATTGACCACCCACAACACCCATCATCAGCTTCACACTTTCTCTGATTTCCACGCCACCTCTTCTTCCAAACATCAACCATCCTACCAGGATCCAAACCTCCCTAGGCCTCCTCCGCTTCCAAACAACCAAGGAGTGAAGTTGAAGGCTTTGACTTTGAACACTGGTCGAGTACGGAAGAACGTGTACAGAggaataaggcaaaggccatgggggaagtgggctgcagaaataagggacccacgtaagggtgtgcgtgtgtggctgggtactttcaacactgctgaagaagctgctcgtgcttacgacaatgccgcCAAGCGCATCCGCGGAGACAAGGCCAAGCTCAACTTTCCCGACAGCAAGAACCCATGTCTTAATCCCTTTCAACTCAAACACCTCTTTTCCAACCTCGAATCCTTCCTTGGTTTGGACTCGCTCTAA 501 0.3593 MCGGAIISDFIDVNLNSGRKLTTHNTHHQLHTFSDFHATSSSKHQPSYQDPNLPRPPPLPNNQGVKLKALTLNTGRVRKNVYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDNAAKRIRGDKAKLNFPDSKNPCLNPFQLKHLFSNLESFLGLDSL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02362 166 PANTHER EREBP TRANSCRIPTION FACTOR 1 142 - -
Gma07g02362 166 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Gma07g02362 166 PANTHER DNA-BINDING DOMAIN 1 142 IPR044808 GO:0003700|GO:0009873
Gma07g02362 166 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Gma07g02362 166 MobiDBLite consensus disorder prediction 37 62 - -
Gma07g02362 166 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Gma07g02362 166 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700|GO:0006355
Gma07g02362 166 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
Gma07g02362 166 SUPERFAMILY DNA-binding domain 81 140 IPR016177 GO:0003677
Gma07g02362 166 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Gma07g02362 166 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02362 Gma-Chr7 46313574 46314511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02362 1 139 AP2-EREBP Transcription Factor Family AT3G16770 58.741 1.80e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g02362 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02362 K09286 - gmx:100527415 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02362 07 46313574 46314511 Gma07g02362 07 46313574 46314511 ECH