Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02343 ATGAAGCTATTTGGTTTCCCCTTGAAGGGTTCGGGTTCCATCAGTATTAGTGAGGACACACCATGTGTCGACGATGGAGGTGGCAAGAAATTCAAGTGCCGCTACTGTCGTCGCCAATTTGCCAATTCTCAAGCACTAGGAGGCCACCAAAATGCGCACAGGAGAGAACGTGCTAAGCTAGCCCAGTTCAAATATCTTCTCCGTCTTCAACAACATGATCAGTACCATCATCATAGGTTCAACCAAGCATCAAATGCTTCACCTAGTGTTAGTGATGCTAGTGCAACAACTAGTGCTGCAGCTTTGTTTCAATTTCATAGTGCAGCTGCTGCAGGGTCATCACATCTTGGGACACTGCTCCTGCAAGTACCAGCTGGTGGCAACGATGTGGATCTCAACCTCAGATTAGCTTGCTCCTCAGAGAACTTGAAGAACTGA 438 0.4726 MKLFGFPLKGSGSISISEDTPCVDDGGGKKFKCRYCRRQFANSQALGGHQNAHRRERAKLAQFKYLLRLQQHDQYHHHRFNQASNASPSVSDASATTSAAALFQFHSAAAAGSSHLGTLLLQVPAGGNDVDLNLRLACSSENLKN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02343 145 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Gma07g02343 145 PANTHER ZINC FINGER PROTEIN 8-LIKE 1 139 - -
Gma07g02343 145 SUPERFAMILY beta-beta-alpha zinc fingers 27 58 IPR036236 -
Gma07g02343 145 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Gma07g02343 145 PANTHER ZINC FINGER PROTEIN 5 1 139 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02343 Gma-Chr7 46144166 46144603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02343 1 78 C2H2 Transcription Factor Family AT1G67030 43.373 1.09e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02343 - - gmx:102670392 270.011