Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02335 ATGGCGAATAACTTAGCGGTGCAACTGGTTGGTTCAGAGATGCATGGATTCCACACATTGCAAGGCACGTACTTCACTGTTGATTTGGATGTGGGGAGCATTATGGAGGAAGCAAGAACCAGATGGCTCCGTCCCAATGAGATTCATGCCATGCTCTGTAATTACAAGTATTTTACCATTAATGTCAAGCCAGTGAATTTGCCAAAAAGTGGTACTATTGTCTTATTTGACCGCAAGATGCTTAGGAACTTTCGAAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATATTATGCACATGGCCAGGATAACCCAAATTTTGTCCGAAGATGTTATTGGCTGCTTGATAAGAGTATGGAACACATAGTCCTTGTTCATTACCGTGAAACACAGGAGATGCAAGGTTCTCCTGTCACTCCTGTAAATTCACACTCCAGTTCTGTCTCTGATCCTCCTGCACCGTGGATTTTATCAGAAGAAATAGATTCAGGAACCACAACTGCATATACTGGTGACATGAGTAACAATATAAATGTCAAAAGTCATGAACTCAGACTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGACACAAATGATCATAACGCCTCTACTGTGCCTAATGGAGGCACTGTTCCATATTTTGATCAACAAGATCAAATTTTACTGAATGACAGTTTCGGCAATGTAGCCAACAATCTATCTGCAGAAATTCCTTCTTTTGGTAATCTTACTCAGCCAATTGCTGGGAGCAACAGAGTTCCTTACAATTTTTCTGAAAGTGTTACTCTTCAGACGATGGACAATCAAGCAAATCCACATGAGCAGAAGAATAATACAGTTTCCTTAAGTGGTGTTGATTCCTTGGACACTTTGGTCAATGATAGATTGCAAAGTCAGGACAGCTTTGGAATGTGGGTGAACCACATCATGTCTGATTCACCATGTTCAGTAGATGACCCAGCTCTTGAATCACCAGTTTCATCCATTCATGAACCATATTCGTCTCTGGTAGTGGATAGTCAGGAATCTTCTCTGCCAGAACAAGTATTTACTATCACTGATGTATCCCCTACATGTGTATCTTCCACCGAGAAATCAAAGGTCCTGGTGACTGGATTTTTTCTTAAGGACTATATGCACCTTTCAAAGTCCAATCTATTATGTGTCTGTGGTGATGTTAGTGTTCCTGCAGAAATTGTTCAGGTTGGGGTCTACCGTTGCTGGGTATCACCACACTCTCCAGGATTTGTGAATCTCTACTTGAGCATTGATGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAATATCGTACTCCTGCTTTGCATGATCCTGCAGTTTCAATGGAAGAGAGTGACAATTGGGACGAGTTTCGACAACAAATGAGGCTTGCATATTTGCTCTTTGCTAAACAATTGAACCTTGATGTTATCTCCAGTAAAGTATCACCTAATAGACTTAAAGAGGCTAGGCAATTCGCCCTCAAAACATCATTTATTTCCAATAGTTGGCAATACTTAATCAAGTCAACTGAAGACAACCAAATTCCATTTTCACAAGCAAAAGATGCCCTGTTCGGAATTACATTGAAAAACAGACTAAAGGAATGGCTTTTGGAAAGAATTGTTTTAGGCTGCAAGACTACTGAATATGATGCTCATGGCCAAAGTGTAATCCATTTGTGTGCAATTTTGGGATATAATTGGGCTGTTTCCTTATTTTCATGGTCAGGCTTGTCATTGGATTTCCGTGATAGGTTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGGGAGAAAATGGTTGCAACTCTGTTGTCTGCTGGGGCGAAGCCAAATTTGGTCACTGATCCTACTCCACAAAATCCTGGTGGATGCACTGCTGCTGATCTTGCTTATATGAGGGGTCATGATGGCTTAGCAGCTTATCTTTCAGAAAAATCTCTGGTTCAGCACTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCACTGGAAACTAGCACGACTGATCCAGTAAATCCTGCAAACCTTACCGAGGACCAGCAGAACCTGAAGGATACGTTGACAGCTTACCGAACTGCTGCTGAGGCAGCTTCCCGCATACATGCTGCATTTAGGGAACACTCTCTAAAACTGAGAACTAAGGCGGTTGCATCTTCCAATCCAGAGGCTCAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCATGCCTTTAGGAACCACGAGACAAAGAAAATGATGGCAGCTGCCGCTCGCATTCAGTGTACATACCGTACATGGAAGATTCGTAAAGAATTTCTTAACATGCGTCGTCAGGCTGTTAAAATTCAAGCTGCATTCCGGTGCTTTCAAGTTCGGAAGCATTATCGCAAAATTCTTTGGTCTGTTGGTGTGGTTGAGAAAGCAGTGCTGCGTTGGCGTTTGAAGAGAAGGGGCTTCCGTGGTCTCCAGGTCAAAACTGTCGATGCGGGAACCGGAGATCAGGATCAGCAAAGTGATGTAGAGGAGGAATTCTTCCGGACTGGTAGGAAGCAAGCCGAAGAACGTGTTGAGAGATCTGTAGTACGTGTGCAGGCTATGTTCCGTTCGAAGAAAGCACAAGAAGAGTACAGGAGGATGAAATTGGCCCTTAATCAAGCAAAGCTGGAGCGGGAATACGAACAACTTCTTAGTACTGAAGTGGACATGCAACTGTAG 2784 0.4249 MANNLAVQLVGSEMHGFHTLQGTYFTVDLDVGSIMEEARTRWLRPNEIHAMLCNYKYFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPNFVRRCYWLLDKSMEHIVLVHYRETQEMQGSPVTPVNSHSSSVSDPPAPWILSEEIDSGTTTAYTGDMSNNINVKSHELRLHEINTLEWDDLVDTNDHNASTVPNGGTVPYFDQQDQILLNDSFGNVANNLSAEIPSFGNLTQPIAGSNRVPYNFSESVTLQTMDNQANPHEQKNNTVSLSGVDSLDTLVNDRLQSQDSFGMWVNHIMSDSPCSVDDPALESPVSSIHEPYSSLVVDSQESSLPEQVFTITDVSPTCVSSTEKSKVLVTGFFLKDYMHLSKSNLLCVCGDVSVPAEIVQVGVYRCWVSPHSPGFVNLYLSIDGHKPISQVVNFEYRTPALHDPAVSMEESDNWDEFRQQMRLAYLLFAKQLNLDVISSKVSPNRLKEARQFALKTSFISNSWQYLIKSTEDNQIPFSQAKDALFGITLKNRLKEWLLERIVLGCKTTEYDAHGQSVIHLCAILGYNWAVSLFSWSGLSLDFRDRFGWTALHWAAYCGREKMVATLLSAGAKPNLVTDPTPQNPGGCTAADLAYMRGHDGLAAYLSEKSLVQHFNDMSLAGNISGSLETSTTDPVNPANLTEDQQNLKDTLTAYRTAAEAASRIHAAFREHSLKLRTKAVASSNPEAQARKIVAAMKIQHAFRNHETKKMMAAAARIQCTYRTWKIRKEFLNMRRQAVKIQAAFRCFQVRKHYRKILWSVGVVEKAVLRWRLKRRGFRGLQVKTVDAGTGDQDQQSDVEEEFFRTGRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLALNQAKLEREYEQLLSTEVDMQL 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02335 927 Pfam IQ calmodulin-binding motif 800 819 IPR000048 GO:0005515
Gma07g02335 927 Pfam IQ calmodulin-binding motif 777 795 IPR000048 GO:0005515
Gma07g02335 927 Coils Coil 892 921 - -
Gma07g02335 927 Gene3D - 772 822 - -
Gma07g02335 927 SMART CG_1_2 34 152 IPR005559 GO:0003677
Gma07g02335 927 Pfam CG-1 domain 37 150 IPR005559 GO:0003677
Gma07g02335 927 Gene3D Immunoglobulins 370 465 IPR013783 -
Gma07g02335 927 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 20 927 - -
Gma07g02335 927 SMART ANK_2a 611 640 IPR002110 GO:0005515
Gma07g02335 927 SMART ANK_2a 650 679 IPR002110 GO:0005515
Gma07g02335 927 ProSiteProfiles Ankyrin repeat region circular profile. 611 639 - -
Gma07g02335 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 753 825 IPR027417 -
Gma07g02335 927 SMART iq_5 774 796 IPR000048 GO:0005515
Gma07g02335 927 SMART iq_5 878 900 IPR000048 GO:0005515
Gma07g02335 927 SMART iq_5 797 819 IPR000048 GO:0005515
Gma07g02335 927 ProSiteProfiles IQ motif profile. 880 908 IPR000048 GO:0005515
Gma07g02335 927 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 20 927 - -
Gma07g02335 927 SUPERFAMILY E set domains 375 462 IPR014756 -
Gma07g02335 927 SUPERFAMILY Ankyrin repeat 562 675 IPR036770 -
Gma07g02335 927 Pfam Ankyrin repeats (3 copies) 562 640 IPR002110 GO:0005515
Gma07g02335 927 Gene3D - 546 681 IPR036770 -
Gma07g02335 927 ProSiteProfiles CG-1 DNA-binding domain profile. 31 157 IPR005559 GO:0003677
Gma07g02335 927 ProSiteProfiles IQ motif profile. 775 804 IPR000048 GO:0005515
Gma07g02335 927 ProSiteProfiles IQ motif profile. 798 822 IPR000048 GO:0005515
Gma07g02335 927 ProSiteProfiles Ankyrin repeat profile. 611 643 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02335 Gma-Chr7 46074077 46082454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02335 34 912 CAMTA Transcription Factor Family AT3G16940 54.989 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gma07g02335 CG-1 1.8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02335 K21596 - gmx:100793970 1850.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02335 07 46074077 46082454 Gma07g02335 07 46074077 46082454 ECH