Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02300 ATGATCCGAATAAGGAGAGTAGGAACCAGACGCTCTGGAGTTTTACCCCAATTGTATCAGGTGAAACAATTTATAGGAATTTTCAGAGGCTCATTCTCCCAAGAGAGTCCTGAAACAGTACCTGCTGGTCGACTTCCAATATACAAGCAAGTGATACTATTGATTTCTTTCTTCTTGGTGTTATACATTGATTTCTTTCTTATGCTTATAATTTGTTGTTTCAGGAAGTCACAGGAAGACATTGAAGAGATTGAAAATTTGGCTAAAGACCCTCGAATTCGAGAAAGGAAGGACATAAAAACTGCAATAGCTTTAGCTATGTTTGGAGGCCAAGAAAAAGATGGGGAAGGAAAGCATAGATTGCGAGGAGACATAAATATTCTTCTCCTCAGTGATCCGGGAACAGCAAAGTCTCAGTTTCTCAAGGAGTGGACTCTTGATGGGGGAACACTCATTGTTCTCACTGCTGCAGTTCGAGGAATTTGTCTTATTGATGAACTTGACAAGATGAATGACCAGGATAGGCATTCTGTTCGGTTATTGTGGCTGCAAATCCTTTGGTGGAAGGATGTTGTTGATCCGGTCACTGATGAAATGCTTGCAACATTTGTCGTTGACAGTCACTTCGAGTCACAACCCAAGGGTGCTAATCAAGATGATAAGTCCTTTAGTAAGTCCCAAGATGTCCATGCATCTGCCATGCCAGCTGATCCAGAGGTCCTTGCTAAGATCCTGCTGTTGGTAATACTTCCTCAACAGCTACTGAAGAAGTACATTATATATGCCAAGTTGAATATTTTTCCAAGGTTACAAGATGCTGATATGGATAAACTGTCACATGTCTATGCCGAACTGTGGAGGGAATCTTCACACGGACAAGGAGTCTCTATTTCTGTAAGGCACATTGAATCAATGATAAGGATGTCTGAAGCTCATGCGAGAATGCATCTCAGGCAACATGTTACTCAAGAGGATGTAGGCATGGCAATTCGTGTTCTACTTGAATCATTCATTTCAACTCAAAAATTTGGGGTGCAGAAGGCTCTTCAAAAGAAGGACTATAATGATTTGCTCCTTTTTATTCTCAGCAACCTTGTACAGAATGCTTTGCATTTCGAAGAAATTATCACTGGATCTGTTGCAGTTCTAACGCATATAGATGTCAGAGTAGATGATCTCTACAACAAGGCTCAAGAGCATGACATTTATGACCTGACAACATTTTTCAATAGCAGTCAATTTTCAAGGGCCTATTTTGTATTGGTTGAAGAACGTAGAGTGATCAGACATCACCTTGCCTGA 1302 0.4063 MIRIRRVGTRRSGVLPQLYQVKQFIGIFRGSFSQESPETVPAGRLPIYKQVILLISFFLVLYIDFFLMLIICCFRKSQEDIEEIENLAKDPRIRERKDIKTAIALAMFGGQEKDGEGKHRLRGDINILLLSDPGTAKSQFLKEWTLDGGTLIVLTAAVRGICLIDELDKMNDQDRHSVRLLWLQILWWKDVVDPVTDEMLATFVVDSHFESQPKGANQDDKSFSKSQDVHASAMPADPEVLAKILLLVILPQQLLKKYIIYAKLNIFPRLQDADMDKLSHVYAELWRESSHGQGVSISVRHIESMIRMSEAHARMHLRQHVTQEDVGMAIRVLLESFISTQKFGVQKALQKKDYNDLLLFILSNLVQNALHFEEIITGSVAVLTHIDVRVDDLYNKAQEHDIYDLTTFFNSSQFSRAYFVLVEERRVIRHHLA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02300 433 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 70 142 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma07g02300 433 SMART mcm 1 338 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma07g02300 433 ProSiteProfiles MCM family domain profile. 81 142 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma07g02300 433 PANTHER DNA HELICASE 70 142 - -
Gma07g02300 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 338 IPR027417 -
Gma07g02300 433 Gene3D - 74 181 IPR027417 -
Gma07g02300 433 PANTHER DNA HELICASE 142 178 - -
Gma07g02300 433 PANTHER DNA HELICASE 188 421 - -
Gma07g02300 433 ProSitePatterns MCM family signature. 160 168 IPR018525 GO:0003677|GO:0005524|GO:0006260
Gma07g02300 433 Pfam MCM P-loop domain 90 142 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma07g02300 433 Gene3D - 183 359 IPR027417 -
Gma07g02300 433 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 142 178 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma07g02300 433 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 188 421 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma07g02300 433 Pfam MCM AAA-lid domain 254 337 IPR041562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02300 Gma-Chr7 45861361 45865079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02300 1 429 Core DNA Replication Machinery Family AT1G44900 42.414 4.59e-119 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02300 K02540 - gmx:106794247 649.432