Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02295 ATGAGCTACCACAGCGCTCGCCGGAGCCCCGGGGGATTCCGCTCTGGCGCTGCTCCGCACCACCGCGCCTTCGACAGTTCCCCGCGTCGCTCCCCCGGCAGGGGCGGCGGATTCCGGCCGATGGGCGGCGAGGGTCCTGGGGAATTCGGATTCAACGGCCACCAGGCGCCGCCGCCGCTCGCTGGCCAGAAGCGAGGGTTTCCTTTCTCCGGACGCGGTGGCGGCTCGCCCGATCATTTAGATGGTGGAAATTTTGCCAAACTTTTTGTCGGATCTGTTCCCCGAACAGCCACTGAAGAAGATATTCGCCCTTTGTTTGAGGAACATGGGAACGTGATTGAAGTTGCCCTCATCAAAGATAAAAAGACAGGACAGCATCAAGGTTGTTGTTTCATAAAATATGCTACTTCAGAAGAAGCTGATCAAGCAATTAGAGCATTGCATAATCAACATACTCTTCCTGGAGGTGTTGGTCCAATCCAAGTGCGATATGCTGATGGTGAACGGGAACGCCTTGGTGCTGTTGAGTACAAATTATTTGTGGGCTCTCTGAACAAACAGGCTACCGTAAAGGAAGTTGAGGAAATTTTCTCAAAATATGGCCGGGTTGAAGATGTTTATCTTATGCGCGATGAGAAGAAACAAAGTCGTGGGTGTGGTTTTGTTAAATACTCACACAGAGATATGGCTCTGGCAGCAATTAATGCGCTTAATGGAATCTACACAATGAGAGGTTGTGAGCAGCCACTAATTGTCCGGTTTGCTGATCCTAAAAGGCCTCGTCAAGGAGATTCCAGGGGTCTTGCATTTGGAGGCCCAGGATTTGGTCCTAGATTTGATGCACCAGGCACAAGACATCCATCCAATATCACAGATCCTATGGGTGATCGTATGCCTCCCTCTAATGCTTGGCATCCCTTGCATCCGCCGAATATGGGGCCATCTTCTAATGCTGGTTTTCATGGCATGGGGTCACCGTTGCTTCCAAGATCTGGTGACATGGCATTGCCTACAGATGCTGGCGGTCCTATGACTAGCTTGGGAGGCCCCATAGATGGTCGTTTTCAAGTTCAGTCTATTCCAATGTCACAACAGAAACCTGTTCAGTCATCTCAGGAACTGCCACCTTCCCACCAGTTGTACCCTCAAGCACCAGTTCCCTATCCACAAACATCTCTTAGGCAGCATGGCCAGCCACAACTTTCTCTCTCTGCTGGTCCTCTTCCATCTCAGAAGATACATGGAGTAAGTGGACAGTTTCTAACTTCTCAGCCCCAAACTCAACAGAGTGCTTTGTCTGCTGCAATTCCTCAGACTCATCTTGATACCGGCATGCAATCTCATACTACATTAACTACACCAAATCAACAGCAAGTTCCTCCCTCTGTGCAGCAGCAGCAGCCACTTCAGCAATCCCCTTCTCCGTTAGCTCAGATGTTATCACAACAAACACAGACTTTGCAAGCAAGCTTTCATTCATCTCAGCAGGCCTTCTCCCAGCTTCAACAACAATTACAGATGATGCAACCTTCTAGTCAAGCATTAACATTGCAGCAAAATGCAGAAGCTAACAAAAAGCAGTCGCAATGGGCTGGGCCTGGGCCTGTAGCACAAACAGTGGCCAGCACTCTTGCAGCTGCACCTGCTGCAGATGTGCCTTCATCCACACCTGCTAATTCTGCCTTACCAGCAATAAACCAGAATATGGCTCTTGTCAAATGTAATTGGACAGAACATATATCTCCTGAAGGCTTCAAGTATTACTATAATAGTGTCACTGGTGAAAGTCGGTGGGAGAAACCTGAGGAGTTGACATTACATGAACAGCAAAAGCAACAGCAAAGGCCATCTGTTCAGCAGTCTCAAACTCAGTCACAACCTTCAATACTACCTGCCCAGCAAGTTCCACAAATCCAACAGGTTCAGCCTCAAAGTCATCTCCAAGGACAAGTTCTCCACCAGCAACAAATACAGCAGCCTTCTTTGTCTTCTTTGTTCCAGGCATATGGAGTTACAGGCCCCCAAAACGTGCAGGAAGTGGGATATAAGCAGTTGCAGGCATCGGTTATTTCTGCTGGTGATCCAGGACGCTACTCGCAGGGTATTCATTCTACACAAGAATTGATGTGGAAAAATAAGCCTGCAGGAGTTTGA 2154 0.4884 MSYHSARRSPGGFRSGAAPHHRAFDSSPRRSPGRGGGFRPMGGEGPGEFGFNGHQAPPPLAGQKRGFPFSGRGGGSPDHLDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDSRGLAFGGPGFGPRFDAPGTRHPSNITDPMGDRMPPSNAWHPLHPPNMGPSSNAGFHGMGSPLLPRSGDMALPTDAGGPMTSLGGPIDGRFQVQSIPMSQQKPVQSSQELPPSHQLYPQAPVPYPQTSLRQHGQPQLSLSAGPLPSQKIHGVSGQFLTSQPQTQQSALSAAIPQTHLDTGMQSHTTLTTPNQQQVPPSVQQQQPLQQSPSPLAQMLSQQTQTLQASFHSSQQAFSQLQQQLQMMQPSSQALTLQQNAEANKKQSQWAGPGPVAQTVASTLAAAPAADVPSSTPANSALPAINQNMALVKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLHEQQKQQQRPSVQQSQTQSQPSILPAQQVPQIQQVQPQSHLQGQVLHQQQIQQPSLSSLFQAYGVTGPQNVQEVGYKQLQASVISAGDPGRYSQGIHSTQELMWKNKPAGV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02295 717 CDD RRM2_FCA 178 257 IPR034645 -
Gma07g02295 717 PANTHER RNA BINDING PROTEIN 35 645 - -
Gma07g02295 717 MobiDBLite consensus disorder prediction 513 534 - -
Gma07g02295 717 ProSiteProfiles WW/rsp5/WWP domain profile. 576 603 IPR001202 GO:0005515
Gma07g02295 717 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 177 257 IPR000504 GO:0003723
Gma07g02295 717 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 86 167 IPR000504 GO:0003723
Gma07g02295 717 SUPERFAMILY WW domain 575 607 IPR036020 GO:0005515
Gma07g02295 717 ProSitePatterns WW/rsp5/WWP domain signature. 576 601 IPR001202 GO:0005515
Gma07g02295 717 Gene3D - 174 265 IPR012677 -
Gma07g02295 717 MobiDBLite consensus disorder prediction 610 641 - -
Gma07g02295 717 MobiDBLite consensus disorder prediction 361 407 - -
Gma07g02295 717 PANTHER FLOWERING TIME CONTROL PROTEIN FCA 35 645 - -
Gma07g02295 717 MobiDBLite consensus disorder prediction 445 480 - -
Gma07g02295 717 MobiDBLite consensus disorder prediction 1 80 - -
Gma07g02295 717 SUPERFAMILY RNA-binding domain, RBD 72 171 IPR035979 GO:0003676
Gma07g02295 717 CDD WW 573 603 IPR001202 GO:0005515
Gma07g02295 717 MobiDBLite consensus disorder prediction 257 324 - -
Gma07g02295 717 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 88 151 IPR000504 GO:0003723
Gma07g02295 717 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 179 246 IPR000504 GO:0003723
Gma07g02295 717 Gene3D - 81 173 IPR012677 -
Gma07g02295 717 Gene3D - 572 618 - -
Gma07g02295 717 SUPERFAMILY RNA-binding domain, RBD 177 280 IPR035979 GO:0003676
Gma07g02295 717 MobiDBLite consensus disorder prediction 361 415 - -
Gma07g02295 717 SMART ww_5 571 603 IPR001202 GO:0005515
Gma07g02295 717 Pfam WW domain 574 601 IPR001202 GO:0005515
Gma07g02295 717 MobiDBLite consensus disorder prediction 601 641 - -
Gma07g02295 717 SMART rrm1_1 178 253 IPR000504 GO:0003723
Gma07g02295 717 SMART rrm1_1 87 163 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02295 Gma-Chr7 45797009 45807059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02295 88 266 Eukaryotic Initiation Factors Gene Family AT1G71770 25.806 1.15e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02295 - - gmx:100798390 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02295 07 45797009 45807059 Gma07g02295 07 45797009 45807059 ECH