Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02278 ATGGATGGAAAAGGAGCAAGAAGTAGCAACACCCTTTTAAGTAGTGAGGACGAGATGGACCTTCGAAGAGGCCCTTGGACCGTCGATGAAGACCTCACTCTTATCAATTACGTTGCCACTCATGGCGAAGGTCGCTGGAATACCCTCGCCCTCTCTGCTGGGCTGAAACGAACGGGGAAGAGTTGCAGATTGAGGTGGCTGAATTATCTGCGTCCTGATGTTCGACGTGGAAACATCACGCTTGAAGAACAACTTTTGATTCTGGAGCTCCATTCTCGCTGGGGAAACCGATGGTCGAAAATTGCTCAATATTTGCCTGGTAGAACCGACAATGAGATAAAGAACTATTGGAGAACCCGTGTCCAAAAGCATGCCAAGCAACTCAAATGCGACGTGAATAGCAAGCAATTCAAGGACACCATGCGTTACATTTGGATGCCAAGGCTCGTGGAACGCATTCAAGCCACCGCTGCCGCCTCCGCCACCACAACCGTTACCGCTACCACCGCGACCAACAATGCATACACCTACGGAAGCAACCTTAATAACAACAAATTCGAGGTTCACGATCACAAGGGCAAAATGGGGTTAACCGATCCTTCAGTTATGAACAATGACTTAGTGGGTTCACATGTCACGCAAAGTTACACCCCTGAGAATAGTAGCACCGGTGCGTCATCATCAGACTCGTTTGGGACTCAAGTCTCAGCAATTTCTGATTTGACTGAATATTACACTGTCACTGTTAGTGGTAACAATAACAATACTAATTCTGCGGATTATTATCAACCCTCTCAAATTAGTTACTCGGATAGTTGCATCACAAGCCCATCTGGGTTGTTCCCTCAAGGGCTAGATTTTCAATCCATGGATCCAAACACCCCGTGGAACATGCAAAGTGGGGACTCCTCTGACAGTTTTTGGAACGTTGAAAGCATGTTGTTCTTAGAGCAGCAACTCATGAATGACAACATGTGA 978 0.4683 MDGKGARSSNTLLSSEDEMDLRRGPWTVDEDLTLINYVATHGEGRWNTLALSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYIWMPRLVERIQATAAASATTTVTATTATNNAYTYGSNLNNNKFEVHDHKGKMGLTDPSVMNNDLVGSHVTQSYTPENSSTGASSSDSFGTQVSAISDLTEYYTVTVSGNNNNTNSADYYQPSQISYSDSCITSPSGLFPQGLDFQSMDPNTPWNMQSGDSSDSFWNVESMLFLEQQLMNDNM 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02278 325 Gene3D - 20 76 - -
Gma07g02278 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 74 IPR017930 -
Gma07g02278 325 SMART sant 22 72 IPR001005 -
Gma07g02278 325 SMART sant 75 123 IPR001005 -
Gma07g02278 325 PANTHER MYB TRANSCRIPTION FACTOR 1 320 - -
Gma07g02278 325 MobiDBLite consensus disorder prediction 212 232 - -
Gma07g02278 325 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Gma07g02278 325 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 320 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma07g02278 325 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Gma07g02278 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Gma07g02278 325 SUPERFAMILY Homeodomain-like 20 117 IPR009057 -
Gma07g02278 325 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Gma07g02278 325 Pfam Myb-like DNA-binding domain 76 119 IPR001005 -
Gma07g02278 325 Gene3D - 80 143 - -
Gma07g02278 325 CDD SANT 25 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02278 Gma-Chr7 45653224 45655653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02278 1 316 MYB Transcription Factor Family AT3G06490 54.464 5.10e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma07g02278 Myb_DNA-binding 4.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02278 K09422 - gmx:100791349 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02278 07 45653224 45655653 Gma07g02278 07 45653224 45655653 ECH