Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02260 ATGGCAGAGACATTCCTATTTACCTCAGAGTCAGTGAACGAGGGACACCCTGACAAGCTCTGCGACCAAATCTCCGATGCTGTCCTCGACGCTTGCCTTGAACAGGACCCAGACAGCAAGGTTGCCTGCGAAACATGCACCAAGACCAACTTGGTCATGGTCTTCGGAGAGATCACCACCAAGGCCAACGTTGACTACGAGAAGATCGTGCGTGACACCTGCAGGAACATCGGCTTCGTCTCAAACGATGTGGGACTTGATGCTGACAACTGCAAGGTCCTTGTAAACATTGAGCAGCAGAGCCCTGATATTGCCCAGGGTGTGCACGGCCACCTTACCAAAAGACCCGAGGAAATCGGTGCTGGAGACCAGGGTCACATGTTTGGCTATGCCACGGACGAGACCCCAGAATTGATGCCATTGAGTCATGTTCTTGCAACTAAACTCGGTGCTCGTCTCACCGAGGTTCGCAAGAACGGAACCTGCCCATGGTTGAGGCCTGATGGGAAGACCCAAGTGACTGTTGAGTATTACAATGACAACGGTGCCATGGTTCCAGTTCGTGTCCACACTGTGCTTATCTCCACCCAACATGATGAGACTGTGACCAACGACGAAattgcagctgacctcaaggagcatgtgatcaagccggtgatcccggagaagtaccttgatgagaagaccattttccacttgaacccctctggccgttttgtcattggaggtcctcacggtgatgctggtctcaccggccgcaagatcatcatcgatacttacggaggatggggtgctcatggtggtggtgccttctccgggaaggatcccaccaaggttgataggagtggtgcttacattgtgagacaggctgctaagagcattgtggcaagtggactagccagaaggtgcattgtgcaagtgtcttatgccattggtgtgcccgagcctttgtctgtctttgttgacacctatggcaccgggaagatccatgataaggagattctcaacattgtgaaggagaactttgatttcaggcccggtatgatctccatcaaccttgatctcaagaggggtgggaataacaggttcttgaagactgctgcatatggacacttcggcagagaggaccctgacttcacatgggaagtggtcaagcccctcaagtGGGAGAAGGCCTAA 1179 0.2824 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFVSNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIHDKEILNIVKENFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGREDPDFTWEVVKPLKWEKA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02260 392 Gene3D - 12 280 - -
Gma07g02260 392 Gene3D - 5 243 - -
Gma07g02260 392 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 1 392 - -
Gma07g02260 392 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma07g02260 392 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Gma07g02260 392 TIGRFAM metK: methionine adenosyltransferase 6 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma07g02260 392 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Gma07g02260 392 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Gma07g02260 392 SUPERFAMILY S-adenosylmethionine synthetase 241 389 IPR022636 GO:0004478|GO:0006556
Gma07g02260 392 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Gma07g02260 392 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 382 IPR022630 GO:0004478|GO:0006556
Gma07g02260 392 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Gma07g02260 392 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Gma07g02260 392 CDD S-AdoMet_synt 6 385 - -
Gma07g02260 392 Hamap S-adenosylmethionine synthase [metK]. 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma07g02260 392 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma07g02260 392 Gene3D - 118 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02260 Gma-Chr7 45366165 45367343 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02260 K00789 - gmx:100820392 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02260 07 45366165 45367343 Gma07g02260 07 45366165 45367343 ECH
Gma07g02260 07 45366165 45367343 Gma10g01425 10 41316352 41318780 ECH
Gma07g02260 07 45366165 45367343 Gma03g02054 03 46111228 46123354 ECH
Gma07g02260 07 45366165 45367343 Gma19g02094 19 49808583 49810392 ECH