Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02253 ATGATCGTGAGCCAGAAGGTGGTAGCGGAAGCGGAAATTATCTGTCAGCAGAACATTCCGATGTTGGACGTGAAGTATCATATTTGCGTGGCGCAAGAACACAACGTGAAGGTTGAGGTTTCTCCCAAATCATCTTCACCTTCTCTTCCGATCTTTGGCCAAGCAGTGAGTTGCTCCGAGATCATTAAAGATTCCATTTTGGAGGCCCCTGCGATGAATCTTGTCCCAAATGTGCGTTCTGGTAGCTATGCTGAGATGGGACCGCGGGTTTCTATGGATGACGAACACATCTGTATTGATGACCTAGGTGCTCAACTTGGATTTGTGTTCAAGTGCCCGATACCGAGTGCATTTTATGCAGTTTTTGATGGTCATGGAGGGCCTGATGCAGCTGCTTTTGTTAAGAGGAATGCTATGCGATTGTTTTTTGAAGATGCAGACATGCTGCAGTCATATGATGCTGATGCGTTTTTTCTACAGAAGTTGGAGGATTCCCATCGGAGAGCTTTTCTACGGGCAGATCTTGCCTTGGCTGATGAACAAACTGTTAGTAGTTCTTGTGGGACTACTGCATTGACTGCCCTTGTGCTTGGAAGACATTTGCTTGTTGCTAATGCTGGTGACTGTCGAGCAGTTCTTTGCCGGAGAGGTGTGGCTGTTGAGATGTCTAACGATCACAGGCCAAGTTATCTACCTGAGCAGAGGAGGGTGGAAGAGTTAGGTGGGTTCATTGATGATGGATATCTCAATGGCTATCTTTCAGTAACTCGAGCCCTTGGGGATTGGGACTTGAAATTTCCACTTGGTGCTGCATCCCCTCTTACTGCGGAGCCGGATGTACGGCTGGTTACATTGACTGAGGATGACGAGTTCTTGATCATTGGATGTGATGGGATTTGGGATGTAATGTCTAGCCAAGTTGCAGTTAGTCTTGTTCGTCGAGGATTAAGAAGGCATGATGACCCACAGCAATGTGCCAGAGAGCTAGTCAAGGAAGCATTGCGCCTAAATACATCAGATAATCTCACTGTGATTGTCGTATACTTGTCGCCCATTGAAAGCATTGTTGAATCATGTCCACCCCAAAGGCGAAGATTCAAAACTTGCAGTCTGTCTGAAGAAGCCCGTAATAGGTTGAAGAGCTTAATTGAGGGAAATTGA 1161 0.4634 MIVSQKVVAEAEIICQQNIPMLDVKYHICVAQEHNVKVEVSPKSSSPSLPIFGQAVSCSEIIKDSILEAPAMNLVPNVRSGSYAEMGPRVSMDDEHICIDDLGAQLGFVFKCPIPSAFYAVFDGHGGPDAAAFVKRNAMRLFFEDADMLQSYDADAFFLQKLEDSHRRAFLRADLALADEQTVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGVAVEMSNDHRPSYLPEQRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGAASPLTAEPDVRLVTLTEDDEFLIIGCDGIWDVMSSQVAVSLVRRGLRRHDDPQQCARELVKEALRLNTSDNLTVIVVYLSPIESIVESCPPQRRRFKTCSLSEEARNRLKSLIEGN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02253 386 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Gma07g02253 386 SMART PP2C_SIG_2 94 349 IPR001932 -
Gma07g02253 386 ProSiteProfiles PPM-type phosphatase domain profile. 79 349 IPR001932 -
Gma07g02253 386 SMART PP2C_4 69 347 IPR001932 -
Gma07g02253 386 Pfam Protein phosphatase 2C 87 341 IPR001932 -
Gma07g02253 386 Gene3D - 68 352 IPR036457 -
Gma07g02253 386 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 8 373 - -
Gma07g02253 386 CDD PP2Cc 79 349 IPR001932 -
Gma07g02253 386 PANTHER PROTEIN PHOSPHATASE 2C 8 373 IPR015655 GO:0004722|GO:0006470
Gma07g02253 386 SUPERFAMILY PP2C-like 75 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02253 Gma-Chr7 45247606 45250042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02253 1 385 PP2C-type Phosphatase Gene Family AT1G48040 56.818 3.49e-149 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02253 K14803 - gmx:100781949 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02253 07 45247606 45250042 Gma07g02253 07 45247606 45250042 ECH