Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02230 ATGTGGCCGGGGGCATCCAGGTCATTTAACTACAACATGGCGCCTCACCACGACATCTTCGTGGTAGCGCCCGCTTCCTCTTTCCACCACCACCACGACCACAACGACGCCGTATTGTCCGATCCAAATAACGGTTCTAACAATTCGAACAACAATCCTGGAACTGCACTCGGTGTGAATGTTTTCCCTCTCCTAACCGCCACGCCATGCCTCGAGAGCGAGGGCATAATGGGAAACATCAGCCACCACCGTAACAGAATTCAGTTATGGGAAGATCACGAGTCTTCTCCACCGCAGCAGCAACAGGGTCACGTGGAGCGTGACACGTGTGGGGATGGGGGTTTGGGTGGGAGTGGGACTAACACGTGCCAGGACTGTGGGAACCAGGCGAAGAAGGACTGTAGTCACCGGAGGTGCAGGACGTGTTGCAAGAGTAGGGGTTTTGATTGCGCCACGCACGTGAAGAGCACGTGGGTGCCGGCGTCGCGGCGGAGGGAGAGGCAGCTCATGACGGTTGCGGCGGCCAGGTCCAGTGGGGACACTTCTGGTGCCAAGAAACCTAGGCTTGTTGCTTCCCAGACTACTTCGCATACTTCAACGTCTAATAATACTAATACCACTCCTCCGAGGAGTTTTGACACTGGTTCTAGCCACCAAGATGTGGGTTTCAAGGAGTCACTACCTTGCCAAGTGCGTGCACCGGCGGTGTTCAAGTGTGTTCGTGTAACAGCAGTGGATGATGGTGGGGAAGATGAGTATGCTTATCAAGCAGTTGTGAAGATTGGTGGCCATGTGTTCAAAGGGTTTCTCTATGATCAAGGGGTTGAGGACAAAGAAGGGTATCCTAATTTATCAGAATTGCATTTGGGTGGTGGAAATGGGGTTTCCTCTTCATCTCCAATGGTGGATCCTTCTCATGATGTCTATGCAGCTTCAGGTGGTGGGTTACTTCTTGGAGGTTCATCAAACTATGGTAATCATCCAATAAATTAA 993 0.5206 MWPGASRSFNYNMAPHHDIFVVAPASSFHHHHDHNDAVLSDPNNGSNNSNNNPGTALGVNVFPLLTATPCLESEGIMGNISHHRNRIQLWEDHESSPPQQQQGHVERDTCGDGGLGGSGTNTCQDCGNQAKKDCSHRRCRTCCKSRGFDCATHVKSTWVPASRRRERQLMTVAAARSSGDTSGAKKPRLVASQTTSHTSTSNNTNTTPPRSFDTGSSHQDVGFKESLPCQVRAPAVFKCVRVTAVDDGGEDEYAYQAVVKIGGHVFKGFLYDQGVEDKEGYPNLSELHLGGGNGVSSSSPMVDPSHDVYAASGGGLLLGGSSNYGNHPIN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02230 330 Pfam Domain of unknown function (DUF702) 120 276 - -
Gma07g02230 330 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 13 325 - -
Gma07g02230 330 MobiDBLite consensus disorder prediction 173 219 - -
Gma07g02230 330 MobiDBLite consensus disorder prediction 93 113 - -
Gma07g02230 330 MobiDBLite consensus disorder prediction 187 219 - -
Gma07g02230 330 MobiDBLite consensus disorder prediction 32 54 - -
Gma07g02230 330 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 122 164 IPR006510 -
Gma07g02230 330 MobiDBLite consensus disorder prediction 39 54 - -
Gma07g02230 330 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 13 325 IPR007818 GO:0003700|GO:0006355
Gma07g02230 330 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 227 275 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02230 Gma-Chr7 44957865 44961148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02230 3 309 C2H2 Transcription Factor Family AT5G12330 52.134 8.42e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gma07g02230 DUF702 2.5e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02230 - - gmx:100816514 643.269