Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02214 ATGGGAATGGTCTATGCTGACATGGACTCTCTCTCTCTTTGTTCCAACTACGGTGTGGTTTCTTCTCATCAAGATAATTGCTATGTCTCCAACGGGGGCACAAACTGGGGTTTTCCCTTCATGAGGGAATGTCCCAACTTTGAGGATCACCCCAACAACAGTGATGATGTTGCTGAAGAGGGTAAAGGGTCTTATAGCAGTGGTGAAGACAGTGACAAAGTTAACCATAATGCTAATAACTTCAACGATGAGAACAGCCCTAATGAGAATTCTAATAGTGGCGGTTCCGGGCATTCCAAGCTTTGTGCTAGAGGGCATTGGAGACCAGCAGAAGATTCCAAGCTCAAGGAGCTTGTTGCTCTTTATGGCCCTCAGAACTGGAACCTCATAGCTGAGAAGTTAGAAGGAAGATCAGGAAAGAGTTGTAGGCTGAGGTGGTTCAACCAGTTGGATCCAAGGATCAATAGGAGGGCATTCAGTGAGGAGGAGGAAGAGAGGCTAATGCAGGCACATAGGATTTATGGCAACAAATGGGCCATGATTGCAAGGCTTTTCCCAGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGAAAGTACAGAGAACAGTCCAGTGCCTACAGGAGGAGGCTGAGCCAATCTTCTTCTGTTTACAGAAGAGTGGAGGAACTTAACACAACAACAACAACAAGCAGCACTCTTGTCTCAAGAAACACAGCCGCTGCAGAACAACAACCACCACCACCCTATTGTCTTAATCTTCCAAATAATGGAGGACTTGCCAACAACATTAACATGCCTAGTTCTCCATATGCTGCAACACCCTTCCATGGAGGAGTAGTGGCTGTTGCTCCTTCTAGTGGGGTTGAGTTTGGCTTATTAAATGGCTCACCCCACATGACTGCTGCCAAAGAAGCATTCTCAACCCCCAAGCTGGTCCCTCATATTGCCTTGTATCCTCAACAAACACCACTTGATTTCTTTTCAGGTGT 1007 0.4618 MGMVYADMDSLSLCSNYGVVSSHQDNCYVSNGGTNWGFPFMRECPNFEDHPNNSDDVAEEGKGSYSSGEDSDKVNHNANNFNDENSPNENSNSGGSGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRLSQSSSVYRRVEELNTTTTTSSTLVSRNTAAAEQQPPPPYCLNLPNNGGLANNINMPSSPYAATPFHGGVVAVAPSSGVEFGLLNGSPHMTAAKEAFSTPKLVPHIALYPQQTPLDFFSG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02214 335 ProSiteProfiles Myb-like domain profile. 104 150 IPR001005 -
Gma07g02214 335 SUPERFAMILY Homeodomain-like 104 197 IPR009057 -
Gma07g02214 335 MobiDBLite consensus disorder prediction 228 253 - -
Gma07g02214 335 MobiDBLite consensus disorder prediction 228 248 - -
Gma07g02214 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 151 205 IPR017930 -
Gma07g02214 335 MobiDBLite consensus disorder prediction 49 103 - -
Gma07g02214 335 CDD SANT 158 198 IPR001005 -
Gma07g02214 335 Gene3D - 104 155 - -
Gma07g02214 335 Pfam Myb-like DNA-binding domain 156 199 IPR001005 -
Gma07g02214 335 Pfam Myb-like DNA-binding domain 104 150 IPR001005 -
Gma07g02214 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 150 IPR017930 -
Gma07g02214 335 SMART sant 155 203 IPR001005 -
Gma07g02214 335 SMART sant 103 152 IPR001005 -
Gma07g02214 335 MobiDBLite consensus disorder prediction 70 98 - -
Gma07g02214 335 MobiDBLite consensus disorder prediction 49 69 - -
Gma07g02214 335 PANTHER MYB TRANSCRIPTION FACTOR 1 335 - -
Gma07g02214 335 CDD SANT 107 148 IPR001005 -
Gma07g02214 335 Gene3D - 157 228 - -
Gma07g02214 335 ProSiteProfiles Myb-like domain profile. 151 201 IPR001005 -
Gma07g02214 335 PANTHER MYB PROTEIN-RELATED 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02214 Gma-Chr7 44677140 44678304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02214 1 220 MYB Transcription Factor Family AT1G69560 55.459 2.16e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma07g02214 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02214 K09422 - gmx:100810632 623.624