Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02208 ATGGCTAGTGTCTTTTCTGCATGTTCAGGTTCTGCTGTTCTTTTTCACAGCAGAAACTCCTTCTCCTCAAAAGGGTCTTTCCTTCACCTCAAAAGGCCTCTCTCAGCCAACTGCGTAGCTTCTTTGGGGACTGAGGTATCAGTGTCACCAGCAGTTGACACTTTCTGGCAGTGGCTCAAGGAAGAGGGTGTTGTCTCTGGCAAGACCCCAGTGAAGCCTGGTGTAGTGCCAGAAGGCCTAGGACTGGTTGCACTCAAGGACATTTCTAGGAATGAGGTTGTCTTGCAGGTCCCCAAGAGGCTGTGGATTAACCCTGATGCTGTGGCAGCTTCAGAAATTGGGAAAGTGTGCAGTGGATTGAAGCCTTGGTTAGCTGTTGCACTGTTTCTGATAAGAGAGAGGTCAAGGAGTGATTCTCTTTGGAAGCACTACTTCAGCATTCTGCCTAAGGAAACTGACTCTACTATATATTGGTGGGTTTCTTTTGTGTGGTTTTCACTGCTGATTGAACTGATTTGTGTAGGGACTCAACTTCTGAACACAACTAGGAGTGTGAAACAATATGTGCAGAATGAATTTAGGAGACTGGAAGAAGAAATTATAATCCCTAACAAGAAGCTTTTCCCTTCTTCTATTACACTTGATGACTTCTTCTGGGCATTTGGAATTCTAAGATCAAGGGCATTTTCTCGCCTTCGCAATGAAAACTTAGTTGTGATTCCATTAGCTGACTTGATAAACCATAGTGCCAGAGTAACTACAGATGATCATGCTTATGAAATTAAAGGAGCAGCAGGCCTTTTCTCCTGGGACTACCTATTTTCTCTGAGGAGCCCCCTTTCTCTCAAGGCTGGGGACCAGGTATATATCCAATATGATTTGAATAAAAGCAATGCCGAGTTGGCTCTGGACTACGGTTTCATAGAACCAAATACAGATCGGAATGCATATACCTTGACACTGCAGATATCTGAGTCAGACCCCTTTTTTGGTGACAAACTAGACATTGCTGAGTCCAATGGTTTTGGAGAGACAGCATACTTTGACATCTTCTACAACCGCCCCCTTCCACCAGGATTGCTTCCATATCTGAGACTGGTAGCTCTAGGGGGCACTGATGCTTTCCTATTGGAGTCAATATTTAGAAACTCCATCTGGGGTCATCTTGAATTGCCTGTGAGCCGCGACAATGAAGAGCTCATATGCAGAGTAGTTAGAGAGACCTGCAAAACCGCCCTTGCTGGTTATCATACAACCATTGAAGAGGATCAAAAGTTGAAAGAAGCAAAGCTAGATTCAAGGCATGCTATAGCAGTTGGAATTAGAGAAGGGGAGAAGAACCTCCTACAGCAAATTGACGAGATCTTCAAGGAAAAAGAATTGGAATTGGCCCAGTTAGAATATTATCAAGAAAGGAGGCTCAAGGACCTTGGACTTTGTGGGGAAAATGGTGATATCCTTGGGGACCTTGGAAAATTCTTCTAG 1485 0.4424 MASVFSACSGSAVLFHSRNSFSSKGSFLHLKRPLSANCVASLGTEVSVSPAVDTFWQWLKEEGVVSGKTPVKPGVVPEGLGLVALKDISRNEVVLQVPKRLWINPDAVAASEIGKVCSGLKPWLAVALFLIRERSRSDSLWKHYFSILPKETDSTIYWWVSFVWFSLLIELICVGTQLLNTTRSVKQYVQNEFRRLEEEIIIPNKKLFPSSITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTDDHAYEIKGAAGLFSWDYLFSLRSPLSLKAGDQVYIQYDLNKSNAELALDYGFIEPNTDRNAYTLTLQISESDPFFGDKLDIAESNGFGETAYFDIFYNRPLPPGLLPYLRLVALGGTDAFLLESIFRNSIWGHLELPVSRDNEELICRVVRETCKTALAGYHTTIEEDQKLKEAKLDSRHAIAVGIREGEKNLLQQIDEIFKEKELELAQLEYYQERRLKDLGLCGENGDILGDLGKFF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02208 494 Gene3D set domain protein methyltransferase, domain 1 47 308 - -
Gma07g02208 494 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 34 485 - -
Gma07g02208 494 SMART set_7 67 299 IPR001214 GO:0005515
Gma07g02208 494 ProSiteProfiles SET domain profile. 62 293 IPR001214 GO:0005515
Gma07g02208 494 CDD SET_RBCMT 63 308 IPR044431 GO:0016279|GO:0018022
Gma07g02208 494 Gene3D - 309 473 IPR036464 -
Gma07g02208 494 PIRSF RMT_SET 1 493 IPR011192 GO:0009507|GO:0030785
Gma07g02208 494 Pfam Rubisco LSMT substrate-binding 325 449 IPR015353 -
Gma07g02208 494 Pfam SET domain 79 292 IPR001214 GO:0005515
Gma07g02208 494 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 34 485 - -
Gma07g02208 494 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 20 492 IPR011192 GO:0009507|GO:0030785
Gma07g02208 494 SUPERFAMILY SET domain 49 314 IPR046341 -
Gma07g02208 494 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 316 487 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02208 Gma-Chr7 44499376 44503079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02208 46 248 NAC Transcription Factor Family AT3G56570 22.967 2.15e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma07g02208 SET 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02208 K00592 - gmx:100818113 924.08