Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02198 ATGGTTGGCGGTAGAAATGGAGAGGGAGCAGGAGAGCAAGCACCGCCACCCTCGACGGCGGCGCGTCACGGAACCACTCTCCGGCCACGCGTCTCCACGGAGAGCGTTTTCAGCTGCAGGTATGGTGGCCTCGGTCCCATGACTCTGCTTTCGAGCTTCTTCGGCGACGGCGATGAGTGCAAGTCGTTCTCGGAGCTCCTCGGCGGCGCCATGGTGGACCCCACCGCACCCTCGCCCATGCCCACCACCCCGTTCACCCTTCCACATGGGTTCATCGATTCACCTTCTCCTCAAGGTCAATTTGGAATGACACACCAGCAGATGCTAGCACAGATCACATCTCAGGCTGTGCCAGCCCACTTCAATGTGCAAATTCACTCTGAACATCCATTCTCTATATCAGCAGTGTCTGCTACCTCTTTGACACAGTTTCCTACAGGATCCAGTACTAGGGTGAAAGAATCCCTTCATTATTCTCACTCTGAACAAAAATTGCAGTCTTCTTCTGTGAATGCTGATAAGCCTAATGATGATGGCTACAATTGGAGGAAGTATGGGCAAAAACATGTGAAAGGTAGAGACTTCTCAAGAAGTTATTACAAATGCACACATCCAAATTGTCCTGTCAAGAAAAAACTTGAGCGTTCTCTTGAAGGTCATGTGACTGCAATTATCTATAAAGGAGAGCACAATCATCAACGTCCTCATCCCAATAAGATCACGAAAGAAACACAGACTTCGAATATAAATTCAGTGTCTAAGATGGATCTAGAATCTAGTCAGGCAACAGGTGAACATGGGTCAGGAACAAGTGATAGTGAGGAAGTAGGTGATCATGAAAGTGAAGAAGATGAGAAAAATGATGAACCTGATGCCAAGAGAAGAAACACAGAAGTCAGGCTCCAGGATCCAGCCTCTTTACATAGAACTGTAGCAGAGACTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTAGATGATGGATATCGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGTGCAACCCAAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCAATGGATCCTAAAGCTGTCCTAACAACATACGAAGGAAAACACAATCATGATGTGCCGGTAGCTAAGACTAATAGCCACACACTTGCCAACAATAGTGCATCACAGCTAAAAGCACAAAATATTGCCATACCCGACGACAAGCATAGTTTCAGCAGTAGGGGTGTTCGGGGGAATGAACAGCGACCTTTGGGAAGTCTAAGATTGAAGGAAGAGCAGATAACATAG 1329 0.4688 MVGGRNGEGAGEQAPPPSTAARHGTTLRPRVSTESVFSCRYGGLGPMTLLSSFFGDGDECKSFSELLGGAMVDPTAPSPMPTTPFTLPHGFIDSPSPQGQFGMTHQQMLAQITSQAVPAHFNVQIHSEHPFSISAVSATSLTQFPTGSSTRVKESLHYSHSEQKLQSSSVNADKPNDDGYNWRKYGQKHVKGRDFSRSYYKCTHPNCPVKKKLERSLEGHVTAIIYKGEHNHQRPHPNKITKETQTSNINSVSKMDLESSQATGEHGSGTSDSEEVGDHESEEDEKNDEPDAKRRNTEVRLQDPASLHRTVAETRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCATQGCNVRKHVERASMDPKAVLTTYEGKHNHDVPVAKTNSHTLANNSASQLKAQNIAIPDDKHSFSSRGVRGNEQRPLGSLRLKEEQIT 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02198 442 MobiDBLite consensus disorder prediction 152 185 - -
Gma07g02198 442 MobiDBLite consensus disorder prediction 161 175 - -
Gma07g02198 442 SMART WRKY_cls 327 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 SMART WRKY_cls 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 MobiDBLite consensus disorder prediction 240 270 - -
Gma07g02198 442 MobiDBLite consensus disorder prediction 226 306 - -
Gma07g02198 442 SUPERFAMILY WRKY DNA-binding domain 319 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 MobiDBLite consensus disorder prediction 286 302 - -
Gma07g02198 442 MobiDBLite consensus disorder prediction 413 442 - -
Gma07g02198 442 ProSiteProfiles WRKY domain profile. 171 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 ProSiteProfiles WRKY domain profile. 322 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 19 441 - -
Gma07g02198 442 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 441 IPR044810 GO:0003700
Gma07g02198 442 SUPERFAMILY WRKY DNA-binding domain 174 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 Gene3D WRKY domain 161 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 Gene3D WRKY domain 312 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 Pfam WRKY DNA -binding domain 177 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 Pfam WRKY DNA -binding domain 328 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma07g02198 442 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02198 Gma-Chr7 44346467 44350497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02198 20 442 WRKY Transcription Factor Family AT2G03340 48.638 5.67e-134 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma07g02198 WRKY 4.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02198 - - gmx:100802109 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02198 07 44346467 44350497 Gma20g00265 20 3301342 3306003 GST