Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02194 ATGGAGGAGAGGAAGAAGTATGTGTGCAAGTATTGCAGCAAGAGGTTTCCTTGTGGGAAGTCTCTGGGGGGTCACATCAGGACCCATATTATGACTGAAGAAAGAAGCAACGATGTTGTTGTTGTTGATGGTGATGATAACAATGACAACATGTTCATCAAGTTGGATGGTACTGTGATGAGGAATAATAAGAAGAGAGATTTGTTATGGTGTGAAGATAATAACAACCCCATTTATGGCCTCAGAGAGAACCCCAAGAAAACAGTGAGGTTTGTGCATTCTGGTGGTGGTGCCAATGCCAACAACAATGAACAGCAACAGAATAAGGAGGATAAGAGGTTCTGCAAAGAGTGTGGGAAAGGTTTCCCATCACTGAAGGCTCTCTGTGGCCACATGGCTTGTCACTCAGAGAAAGAGAAGAGAACAACAACAACAACCATCAAGTTTGAAGAAGAGAAACTGGTTATGGATAGTCGTTCTGACACCGAGACTTGTGCTCCAACAACTCATCCAAGGAGATCCAAGAGAATGAGGGTGAAGAAGACCATTAACCTTTCCAATCACAACCCTTTTTTTTCTTTTTCTTCTTCTTCTTCTTCTGGTGTTGTTCCTTTGGCCAATGGTTCTTCACCTGTGTCAGAGGTGGAGCAGGAGGAGCAAGAAGAGGTGGCTAGGTGCTTGATGCTGTTGTCTAGAGATTCTAGCTTCAACTTCAAGGGTGGTCGTTTTGCTTCGGTTACTGAATCTTCTGATAACAACTCGGTTATTCTAGAAGCAAAATTATCATCTCCTGATACCCGGATTGGTGTCAGCAATG 817 0.4345 MEERKKYVCKYCSKRFPCGKSLGGHIRTHIMTEERSNDVVVVDGDDNNDNMFIKLDGTVMRNNKKRDLLWCEDNNNPIYGLRENPKKTVRFVHSGGGANANNNEQQQNKEDKRFCKECGKGFPSLKALCGHMACHSEKEKRTTTTTIKFEEEKLVMDSRSDTETCAPTTHPRRSKRMRVKKTINLSNHNPFFSFSSSSSSGVVPLANGSSPVSEVEQEEQEEVARCLMLLSRDSSFNFKGGRFASVTESSDNNSVILEAKLSSPDTRIGVSN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02194 272 SMART c2h2final6 7 29 IPR013087 -
Gma07g02194 272 SMART c2h2final6 113 135 IPR013087 -
Gma07g02194 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Gma07g02194 272 SUPERFAMILY beta-beta-alpha zinc fingers 5 135 IPR036236 -
Gma07g02194 272 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Gma07g02194 272 ProSitePatterns Zinc finger C2H2 type domain signature. 115 135 IPR013087 -
Gma07g02194 272 Pfam C2H2-type zinc finger 115 137 - -
Gma07g02194 272 Pfam C2H2-type zinc finger 7 29 - -
Gma07g02194 272 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 268 - -
Gma07g02194 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 113 140 IPR013087 -
Gma07g02194 272 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 268 - -
Gma07g02194 272 Gene3D Classic Zinc Finger 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02194 Gma-Chr7 44289911 44290727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02194 5 263 C2H2 Transcription Factor Family AT1G26610 46.538 2.72e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma07g02194 zf-C2H2_6 2.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02194 - - gmx:102665457 491.5