Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02191 ATGGCAAAGGAGGCCATACCAATACCAATAGGGATAGTTCTTGATTTGAACTCCTCAATTGGAAGCATGTCTAATAGCTGCATATGGATGGCATACCAGGATTTCTATGAACGTCACCCTCATTACAAAACCAGACTTGCTCTTCAAACCCGAGACTCTCGGGATAATGTTGTCACAGCAGCATCTGTAGGTACTCAAGAATTGTTAAATGAGAAGGTGCATGCAATCATTGGACCACAAACATCAGAACAAGCTTGGTTCGTCATAGAACTTGGAAGCAAAGCTCAAGTGCCAGTGATCTCGTTTTCCGCCACAAGTCCATCGCTTTCCTCGACCCAGAAGCCTTATTTCATTCGCGCCGCCAGGGATGATTCCTCCCAGGTGGAAGCCATAGCTGCCATTGTCCAAGGCAACGGTTGGCGCGAAATAATCCCCATATACGAAGACACCGAATATGGCAATGGTCTTAACCCATATCTAAACGATGCCTTTGTAAAAATTGGCACCCGAGTGCCTTACAGAAGTGTCATTAGTCCAGGCTCAGGGGGCGCCGAGATTTCAAATGAGCTCAAGAAGCTGAAGTTAATGTCTACAAAAGTGTTTCTTGTTCACATGAGCACTGACCTTGGGTGCAAGGTGTTTCTGGCTGCAAAGAAAGAAGGGATGATGACAATTGGATATGCATGGATAGTTACTGAAGGCCTATCTGCAGAGGTAGACCCTATGGTGCTAAAATGCATAGGAACCATGCAAGGTGTGTTGGGAGTTAGGCCAAGCCCAAAACACACTAAAAGGCTTGACAACTTCAAAGAAAGATATGGAAATACTGTAACCATCTTTGGATTGTGGGCATATGATTCTGTTTGGGCATTAGCCAAGGCTGTGGAGAAAGTTTGGGGGGAAAACGTCACTGCTACCCTTCACAACACAATCCTGGCTACCAAATTCCATGGCCTCTCTGGTAATTTCCATTTGGTTAAAGGACAACTAGAGCCATCAATTCTTGAGGTGTTCAATGTTGTGGAGCAAACAGAGAGGAGCATTGGAAATTGGATGCCAGAGAGGGGGCTTTCTAAATTAGAGCAACCAAAATGGCCTGGTAACACAACAGAGCCCCCAGCAAAGTTGAGGATTGGAATCCCACCAACAAATAGTGTCAATGAATTCAAAAAATTTCTCAACTTCTCCTTTGATGTGTTCTTTGAAGTCTTGAAGGTTTTACCCTTTCCCCTGCATTATGAACTCTTACCTTTTGAGAAACATGGAGAGACTGCTGGTACCTACGATGAACTTCTTATGCAAATCAAGGAAAAGGCAAGTTTTTCAAAGTATGATGCCGTGGTTGGGGACGTGACAATTGTGGCTAAGCGCTCAGAGTATGTTGATTTTACAATGCCATTTTCAGAATCAGGTGTGGCAATGCTGGTTTTGGCGAAGCATGATGAGAGACAAAACATTTGGATTTTCCTGAAGCCATTTAATTGGGACCTTTGGTTGACAACTGGTGCAGCTTTCATCTTCACAGGCTTCATCGTTTGGTTTTTCGAACACCGCTCAAACACGGAGTTCAGGGGCACTCCAAAGAACCAAATCGGCATGGCTCTCTGGTTTTCCTTCTCAACACTCGTATTTGCTCATAGGGAGAAGGTAGAGAACAAATGGTCACGATTTGTGCTGATTATATGGTTCTTTGTGGTACTCATCATAACGCAAAGTTACACTGCAAGTTTAGCTTCAATTCTCACGGTACAGAAACTGCAGCCTCAGTTTATGGACGTAGAAGAGATAAAAACAAACAATTTCTTTGTGGGGTATCATAAGGATTCCTTTGTGAAAGGGCTACTAATTGAAAAGTTAGGATTCAATGAATCTAAGTTAAAGGGTTACCATGGCCCTAAGGCCTATCAACAAGCTCTGTCTCTTGGAAGCAACAATGGAGGAGTTGCTGCTGTTTTTGATGAAATTGTCTTTATTAACCTCTTTCTCATGAAATATGGCTGCAAAAAGTATCAGATTGTTGGACCAACATACAAAACCGATGGATTTGCCTTCGCATTCCCACGAAACTCTCCATTGGTTCCTTATTTTTCGAGGTCGATCTTAAACGTCACTGAAAATAAAACAACCTTTGATGGGATTAAGAAGAAGTACTTCTCAAGAGACGTCATAAGTGAAGATCCAAGTACCAGAATGGCATTTAGAAGCACTAACTTAACATTAAAGAGCTTTGGGGGGCTTTTCATCATCATATTGTTCACTTCATTTCTCGCAGTCATGGTCCATTTGTTTAAGTTCATGCATTCAAAATGGACTGCTCGAGACTTTCAGCGATCCCTTTCGGAGATGATGACTGAATTGGCAAAGCATTTCAACAAAGAAGAGTGCTCTTTACATCCTCCTCCAATAATGGAGGAAGGTTCACTTGACCCTGATGGCACCAATTATCAATCAATAATTCACAACGAGGAAGATCTTAGACAGCTATAG 2487 0.4266 MAKEAIPIPIGIVLDLNSSIGSMSNSCIWMAYQDFYERHPHYKTRLALQTRDSRDNVVTAASVGTQELLNEKVHAIIGPQTSEQAWFVIELGSKAQVPVISFSATSPSLSSTQKPYFIRAARDDSSQVEAIAAIVQGNGWREIIPIYEDTEYGNGLNPYLNDAFVKIGTRVPYRSVISPGSGGAEISNELKKLKLMSTKVFLVHMSTDLGCKVFLAAKKEGMMTIGYAWIVTEGLSAEVDPMVLKCIGTMQGVLGVRPSPKHTKRLDNFKERYGNTVTIFGLWAYDSVWALAKAVEKVWGENVTATLHNTILATKFHGLSGNFHLVKGQLEPSILEVFNVVEQTERSIGNWMPERGLSKLEQPKWPGNTTEPPAKLRIGIPPTNSVNEFKKFLNFSFDVFFEVLKVLPFPLHYELLPFEKHGETAGTYDELLMQIKEKASFSKYDAVVGDVTIVAKRSEYVDFTMPFSESGVAMLVLAKHDERQNIWIFLKPFNWDLWLTTGAAFIFTGFIVWFFEHRSNTEFRGTPKNQIGMALWFSFSTLVFAHREKVENKWSRFVLIIWFFVVLIITQSYTASLASILTVQKLQPQFMDVEEIKTNNFFVGYHKDSFVKGLLIEKLGFNESKLKGYHGPKAYQQALSLGSNNGGVAAVFDEIVFINLFLMKYGCKKYQIVGPTYKTDGFAFAFPRNSPLVPYFSRSILNVTENKTTFDGIKKKYFSRDVISEDPSTRMAFRSTNLTLKSFGGLFIIILFTSFLAVMVHLFKFMHSKWTARDFQRSLSEMMTELAKHFNKEECSLHPPPIMEEGSLDPDGTNYQSIIHNEEDLRQL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02191 828 PANTHER GLUTAMATE RECEPTOR 8 768 - -
Gma07g02191 828 CDD GluR_Plant 375 718 - -
Gma07g02191 828 SUPERFAMILY Periplasmic binding protein-like II 375 721 - -
Gma07g02191 828 Gene3D - 487 610 - -
Gma07g02191 828 Gene3D - 130 293 - -
Gma07g02191 828 Pfam Bacterial extracellular solute-binding proteins, family 3 443 719 IPR001638 -
Gma07g02191 828 PIRSF IGluLR_plant 2 816 IPR017103 -
Gma07g02191 828 Gene3D - 29 129 - -
Gma07g02191 828 Pfam Receptor family ligand binding region 30 341 IPR001828 -
Gma07g02191 828 SMART GluR_14 375 720 IPR001320 GO:0015276|GO:0016020
Gma07g02191 828 CDD PBP1_GABAb_receptor_plant 10 359 IPR044440 -
Gma07g02191 828 Pfam Ligand-gated ion channel 720 752 IPR001320 GO:0015276|GO:0016020
Gma07g02191 828 SUPERFAMILY Periplasmic binding protein-like I 7 367 IPR028082 -
Gma07g02191 828 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 768 - -
Gma07g02191 828 Gene3D - 369 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02191 Gma-Chr7 44254210 44258853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02191 8 798 Ion Channels AT2G29100 41.121 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02191 K05387 - gmx:100800495 1637.08