Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02190 ATGACAATGTCAATGCTAAATCTCCAAAAGTACTTTCCCTCGCTCCCCTTCTACCTCATACTGTGCCTCTGGCCATTACACTTGATGGCAAGGGAGGTTACGATACCAATAGGGGTAGTTCTTGATTTGAACTCCCCAATTGGGAGCATGGCTAACAGCTGCATATGGATGGCACATCATGATTTCTATAAACAGCATCCTCGTTTTCAAACCAGACTTGATCTTCGAACAAGAAATTCTGGCGGTGATACAGTCAAAGCAGCATATGCAGCCTTTGATTTAATAACGAAAGAAAAGGTGAAGGCAATTATTGGACCTCAAAAATCAGAACAAGCAAGGCATGTAATAAACCTTGGGCGCGAGCTTGGCATCCCCATTATCTCCTTCTCCGCTACAAGTCCATCTCTTTCCCCAGCCCACACTCCCATTTTCATACGAATGGCACAAAATGATTCTTCTCAGGTGAAAGCCATAGCAGCCATTGTGGAAGCATATGGATGGCGAGAAGTTGTCCTTATATACGAAAACACTGAATACGGAAACGGTCTTGTCCCACATCTGATAGATGCATTGGATGCAGTGGACACAAAAGTACCTTACAGAAGCGTCATTGACCCCATTTTTGAAGAGTCCCACATTTTGGAAGAGCTCGAAAATCTCAAGGAAAATTCGACAAGAATATTCATTGTTCACATGACGGGTGAACATGGGTCGAGATTCTTTTCAGCTGTAGAGAAAGCTGGAATGATGAGTGAAGGGTATGGATGGATAGTCACTGAAGGGTTATCTGTTGAGTTAGATCCTTCAGCTCTAGAAAGAATGGACAACATGCAAGGTGTCTTGGGAGTGAGGACAATAGTGAGAAACAATGAAAAGCTCGATGATTTTAAGAAAAGATGGAAAACCTTGTCTTTTATGGAAAACAACATAAAGTATCACGCTTATCGTACTCATACCATCACATTGTTTGGGTTGTGGGCTTATGATACAGTGTGGGCATTAGCCATGGCCGTAGAAAATGCAACCAATTATGGGAAACAAAGTGCTTCCCTTGTAAATGCAATCCTAGCTACGAAATTCCAAGGCCTATCTGGGTATGTTGATTTGAAAGGAGGACAATTAGAGTCGTCAGTGGTTGAAGTGTTCAATGTGATAGGACACAAAGAGAGAATTATTGGATATTGGAGCCCTAAAAGAGGGCTATTCCAAGATGACCAAGAAAAGCAGAAAGTGAGGCAGCCAGTTTGGCCAGGTTACACAATGGATCAGCCACCCAAGTTGAGATTTGGGGTTCCTGTGAGAAAGGGTTTCACTGAATTTGTAAAAGTGGAAACCATATTTAACACCACAAAAGTTTCTGGGTTTGTTGTTGATGTGTTTTTAGAGGTCTTGAAGGCATTGCCTTTCTCAGTATCATACGAATTCGTCCCCCTAGAAAACTATGGCGCCCTTGCTGGACCTATTGCAAACAACAAGTCCATGAAGTTCGATGCTGGAGTCGGAGACATAACAATTGTTTATGATCGCACAAATTATTTAAATTTCACGTTGCCTTATTTAGAATCTGTGGTGTCAATGGTAGTTTCAATGAAGCATGATGAGAAACGAAACATGTGGGTGTTCTTAAAGCCTCTAAGTTGGGGTCTTTGGTTGACTACTGGTGCAGCCTTGGTCCTCATCGGTTTCGTTGTGTGGTTTCTAGAGCATCGCTCAAACAACACAGCCTTTAGGGGGACCCCAAAACAACAACTTGGCATTGTTTTTTGGTTTTCCTTCTCCACACTTGTCTTTGCTCACCGGGAGAGATTGGTAAGTAATTGGTCCAGAGGTTTGTTGATTATATGGATATTTGTAGTGCTCATCATCACCCAAAGTTACACTGCAAGTTTAACTTCGATGCTAACAATAGAAAGCCTACAACCGGAATTCATTGACATAAAAGAGATAAAAAGGAATAATTATTTTGTGGGATATCAGAATCAATCCTTCGTGAAAACAATTTTAATAAATGAATTAGGATTCAATGAGTCTCAGTTGAAGGCCTATAATACTCCTGAAGAGTATCATGAAGCACTTTCAAAAGGGACCAACAATGGTGGGGTGGCGGCTATCTTTGATGAAAGTCCATACATCAACGTTTTTCTATCAAAATATGACACTGGCTATGCTACGGTGGGACCGTTTTATAAAACAAATGGACTTGCCTTTGCATTTCCCCCACAGTCACCTCTAGTGCCATATTTTTCGAGGGCACTCCTAAATGTCATTGAAGATAAAGACAAGTTTGAAGGGATTAAAAACAAGTATTTCTCGACAAGAATTGTCTCTAAAGATCAAAGTACCTCAATTTTAGACAGCCAAGGTCTTACGGTGAATAGCTTTGCAGGTCTTTTCATCATCACAACAATTGCCTCATTCGTATCATTCACATTTTATGTGTTTACTTTCCTATACTCACAATAG 2463 0.4097 MTMSMLNLQKYFPSLPFYLILCLWPLHLMAREVTIPIGVVLDLNSPIGSMANSCIWMAHHDFYKQHPRFQTRLDLRTRNSGGDTVKAAYAAFDLITKEKVKAIIGPQKSEQARHVINLGRELGIPIISFSATSPSLSPAHTPIFIRMAQNDSSQVKAIAAIVEAYGWREVVLIYENTEYGNGLVPHLIDALDAVDTKVPYRSVIDPIFEESHILEELENLKENSTRIFIVHMTGEHGSRFFSAVEKAGMMSEGYGWIVTEGLSVELDPSALERMDNMQGVLGVRTIVRNNEKLDDFKKRWKTLSFMENNIKYHAYRTHTITLFGLWAYDTVWALAMAVENATNYGKQSASLVNAILATKFQGLSGYVDLKGGQLESSVVEVFNVIGHKERIIGYWSPKRGLFQDDQEKQKVRQPVWPGYTMDQPPKLRFGVPVRKGFTEFVKVETIFNTTKVSGFVVDVFLEVLKALPFSVSYEFVPLENYGALAGPIANNKSMKFDAGVGDITIVYDRTNYLNFTLPYLESVVSMVVSMKHDEKRNMWVFLKPLSWGLWLTTGAALVLIGFVVWFLEHRSNNTAFRGTPKQQLGIVFWFSFSTLVFAHRERLVSNWSRGLLIIWIFVVLIITQSYTASLTSMLTIESLQPEFIDIKEIKRNNYFVGYQNQSFVKTILINELGFNESQLKAYNTPEEYHEALSKGTNNGGVAAIFDESPYINVFLSKYDTGYATVGPFYKTNGLAFAFPPQSPLVPYFSRALLNVIEDKDKFEGIKNKYFSTRIVSKDQSTSILDSQGLTVNSFAGLFIITTIASFVSFTFYVFTFLYSQ 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02190 820 Pfam Bacterial extracellular solute-binding proteins, family 3 449 771 IPR001638 -
Gma07g02190 820 PIRSF IGluLR_plant 8 820 IPR017103 -
Gma07g02190 820 CDD PBP1_GABAb_receptor_plant 37 403 IPR044440 -
Gma07g02190 820 Pfam Receptor family ligand binding region 58 385 IPR001828 -
Gma07g02190 820 PANTHER GLUTAMATE RECEPTOR 35 818 - -
Gma07g02190 820 CDD GluR_Plant 426 770 - -
Gma07g02190 820 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 818 - -
Gma07g02190 820 SUPERFAMILY Periplasmic binding protein-like I 34 396 IPR028082 -
Gma07g02190 820 SUPERFAMILY Periplasmic binding protein-like II 423 771 - -
Gma07g02190 820 SMART GluR_14 426 772 IPR001320 GO:0015276|GO:0016020
Gma07g02190 820 Gene3D - 46 377 - -
Gma07g02190 820 Pfam Ligand-gated ion channel 772 804 IPR001320 GO:0015276|GO:0016020
Gma07g02190 820 Gene3D - 423 537 - -
Gma07g02190 820 Gene3D - 150 399 - -
Gma07g02190 820 Gene3D - 538 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02190 Gma-Chr7 44239996 44247558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02190 17 818 Ion Channels AT2G29110 43.329 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02190 K05387 - gmx:100799966 1634