Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02175 ATGGAAGAAGTTTGTCTGAATAGTGAGCCACTTTTTGATGAACGCAATGAGGTTGATGTTGAGGGGAACTCTTCTATCGCAGAACATGATCTTGAATCTTTAAACTCACAAACGAATAACTCTCCACTTCCAACTGTGGATCGGAAAAAAAAAGAGTGCTATAGAGCAAAACTTAGCTGCAGTAGTGCTGGTTTTAAGAAAAAAAGTGAAGCCAATAATCCAAGACCAAAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAGAATGGTTGAGTCCAAGAGATGGAGAATAGTGGAAGTTGAGCTTCAACACGACCATCAAGTGAGTCCACAGAGCAAACGGTTTTACAAGTCACATAAGGAAATGATTCTTGAAGCCAGCAAATCACGACCACTGCCAGAGCCTGTAACAGAAGTACACACCATTAGGAAGCACTTGAAAGAAGCCATGGCGGATTTGGAGTCTAGAAAAGTAAGCTTTGAATTGAAAACGAGATGTAATTTTGAGGTCCAGCTTGCAAAGGGGTTTACAAAAGAAATCTTTCAAAAGTTTCAATCTGAGGTTGATGGCATGTACTCTTGCTTCAACACAAGACAGGTAAGTGTCAATGGATCTATAATAACATACATTGTGAAAGAAAGTGTTGAAGTTGAGGGGAATGAGAAGGGAGTTAAAAGTTTTGAAGACTTATACGAGACTACAGAATTGGATATTCGTTGCATTTGCAGTTTGTTCAATTACAAAGGATATCTGTGCAAGCATGCATTGAATGTTCTCAATTATAACAGCATTGAGGAAATCCCATCTCAGTACATCCTGAACCGTTGGAGAAGGGATTTCAAGCAAACGTTTAATCAATTCCATGTCTCTGATAACATTGATACCTACAACCCTGTGGACTTGTATACTCATCTGTTCAACAGTGCTCTTCCAGTGTTAGAAGTAGGGGCACAGTCACGGGAACATTATATGGTTGCTGTATAA 987 0.3931 MEEVCLNSEPLFDERNEVDVEGNSSIAEHDLESLNSQTNNSPLPTVDRKKKECYRAKLSCSSAGFKKKSEANNPRPKTRTGCPAMIVIRMVESKRWRIVEVELQHDHQVSPQSKRFYKSHKEMILEASKSRPLPEPVTEVHTIRKHLKEAMADLESRKVSFELKTRCNFEVQLAKGFTKEIFQKFQSEVDGMYSCFNTRQVSVNGSIITYIVKESVEVEGNEKGVKSFEDLYETTELDIRCICSLFNYKGYLCKHALNVLNYNSIEEIPSQYILNRWRRDFKQTFNQFHVSDNIDTYNPVDLYTHLFNSALPVLEVGAQSREHYMVAV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02175 328 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 143 327 IPR031052 GO:0006355
Gma07g02175 328 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 140 IPR031052 GO:0006355
Gma07g02175 328 MobiDBLite consensus disorder prediction 28 44 - -
Gma07g02175 328 Coils Coil 144 164 - -
Gma07g02175 328 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 143 327 - -
Gma07g02175 328 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 47 140 - -
Gma07g02175 328 SMART 26again6 239 266 IPR006564 GO:0008270
Gma07g02175 328 ProSiteProfiles Zinc finger SWIM-type profile. 233 264 IPR007527 GO:0008270
Gma07g02175 328 MobiDBLite consensus disorder prediction 1 48 - -
Gma07g02175 328 MobiDBLite consensus disorder prediction 8 26 - -
Gma07g02175 328 Pfam FAR1 DNA-binding domain 47 110 IPR004330 -
Gma07g02175 328 Pfam SWIM zinc finger 236 260 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02175 Gma-Chr7 44049675 44051622 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma07g02175 FAR1 7.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02175 K17604 - gmx:100811666 340.117