Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02170 ATGTTTTCTCGCAGATCAAGTGGAAGAGTGGCTAGTGGTAGAGTTGCATTAGAAAATGGAGTCCCATTACCACTGTTGCCTGATCCTAAAGCAAATTTACAATGGGATGAGGTTAAACCACTTTCAGGAAAACCATACTGGCATAGTGTTCTTTCGCCTACAAATCTTCAACCCCGTTATAACTTGATGCCGGGGATGAACTTGCGGTCAAAACTTCCTTCTAATGAGGTCCCTACTATTCTCATCTATGGGGGCAAGAGCTGGGACATGGTGTATTATGGACAAAGCAAACAGAAGGCTTTTGGTGTCACAGGCTGGAAAAAATTTGTTATTGATAATTGTTTGAGGGTTGGAGATGCTTGCATTTTTGAGCTCATGGAAAGCAGTGACAAGAAAGTCATACTTGAAGTTCAAATTCTTAGAGGTGACATCCCATCTGAATGGCTTGGAaatgaaatgatcataggtcaagggaatgaaatgatcataggtcaagagaatgaaatgatcataggtcaCAGTCGGGAAAATCCAATTGTCCTTAACTAG 549 0.3679 MFSRRSSGRVASGRVALENGVPLPLLPDPKANLQWDEVKPLSGKPYWHSVLSPTNLQPRYNLMPGMNLRSKLPSNEVPTILIYGGKSWDMVYYGQSKQKAFGVTGWKKFVIDNCLRVGDACIFELMESSDKKVILEVQILRGDIPSEWLGNEMIIGQGNEMIIGQENEMIIGHSRENPIVLN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02170 182 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 38 151 - -
Gma07g02170 182 SUPERFAMILY DNA-binding pseudobarrel domain 43 136 IPR015300 -
Gma07g02170 182 CDD B3_DNA 84 141 IPR003340 GO:0003677
Gma07g02170 182 Gene3D - 32 143 IPR015300 -
Gma07g02170 182 SMART B3_2 46 143 IPR003340 GO:0003677
Gma07g02170 182 Pfam B3 DNA binding domain 84 134 IPR003340 GO:0003677
Gma07g02170 182 ProSiteProfiles B3 DNA-binding domain profile. 85 143 IPR003340 GO:0003677
Gma07g02170 182 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 38 151 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02170 Gma-Chr7 43996154 43999459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02170 88 143 REM Transcription Factor Family AT4G33280 45.614 1.05e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma07g02170 B3 1.7e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02170 - - gmx:100804948 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02170 07 43996154 43999459 Gma20g00222 20 2690805 2694016 GST