Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02159 ATGGATGCGAATCGCGAGCAAATTGTTGTTGACGTTGGATCAGTGGTGGAAGCCGTTTCTGCTGACGATGGTCACGCTCCTCTCTACAGCATCGAAAGTCTCTGCATGCGTTGCCATGAAAACGGGATTACAAGATTTTTATTGACTTCAATTCCCAACTTCAGAAAGATTTTGTTGTCAGCTTTTGAATGTCCCCACTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCGCGTGGTTGTTGTTACTCTCTGGAGATCCCATCAGGCCAACAGAAGATGCTAAATCGACAAGTGGTAAAAGCGGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAGCTGATGAACTTCAGACCCTTCAAGAGGAACGCAAAAAAGTGGCTCCAGAGACAGCTGAGGCAATTGATCAGTTCCTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCAGCCTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCATTGACTATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCCACTCACATTGAAGGAATTCATGATGAAACACCAGAAGGAGGAGAAGCTGTGACTGCTGATCAAGTGAGGAGAGAACCTCATGGGTCAATAGGGGCAACAGCTGGTCATCGAGCCATTGCACAGAGTAACAGTTCAGAAATTGCTGAAGCCTTATTTCGATATACTGCACCAGAAGAGGTGATGACATTTCCATCTTCTTGTGGTGCTTGTGCTGCTAGTTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATAGTTATGGCATCCACATGTGATTCCTGTGGTTACCGCAACTCTGAGTTGAAACCTGGTGGCCGAATTCCTGAAAAAGGAAAAAGAATTACTCTTAATGTGAAGAATGTTAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCTGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATTGTTACTACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTTGATGAACAGAGAAAAGGCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAG 1278 0.4374 MDANREQIVVDVGSVVEAVSADDGHAPLYSIESLCMRCHENGITRFLLTSIPNFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLEIPSGQQKMLNRQVVKAESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQTLQEERKKVAPETAEAIDQFLVKLRACATGESAFTFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSTHIEGIHDETPEGGEAVTADQVRREPHGSIGATAGHRAIAQSNSSEIAEALFRYTAPEEVMTFPSSCGACAASCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRIPEKGKRITLNVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDEQRKGKWIDFKARLNK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02159 426 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 8 426 - -
Gma07g02159 426 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 35 217 IPR004457 GO:0008270
Gma07g02159 426 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 290 425 IPR004457 GO:0008270
Gma07g02159 426 SMART zpr1 33 193 IPR004457 GO:0008270
Gma07g02159 426 SMART zpr1 289 426 IPR004457 GO:0008270
Gma07g02159 426 Gene3D ZPR1, A/B domain 79 220 IPR042451 -
Gma07g02159 426 Gene3D ZPR1, A/B domain 335 426 IPR042451 -
Gma07g02159 426 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Gma07g02159 426 Gene3D ZPR1, zinc finger domain 24 78 IPR042452 -
Gma07g02159 426 Pfam ZPR1 zinc-finger domain 33 192 IPR004457 GO:0008270
Gma07g02159 426 Pfam ZPR1 zinc-finger domain 289 425 IPR004457 GO:0008270
Gma07g02159 426 PANTHER ZINC FINGER PROTEIN ZPR1 8 426 IPR040141 -
Gma07g02159 426 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02159 Gma-Chr7 43737536 43749808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02159 1 426 C2H2 Transcription Factor Family AT5G22480 74.473 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02159 K06874 - gmx:100798741 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02159 07 43737536 43749808 Gma20g00205 20 2294995 2320446 GST