Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02125 ATGTCTGATTCATTTGGTAGCACCTTTCACTCTTCCGCTCCAAACTCCACCCTCAATTCCCATGCACCCCCGAAAATCACCACATTCTGCTCAATAGCCCAACCTTATTGCATTTGCACCCACTGCAACCACATCCTCACCTTCAACCACCATGTTGGTAATTTAGCAGAGGAAGGGACAAATAGCACAGGGTCCCATAACAATAATGTGCAGTCTCAGCCGCAACATAGCACAAGGTGGAGTCCAACGCCAGTGCAGTTACTAGTCCTTGAGGAATTGTATAAACAAGGCACAAAAACACCCTCAGCTGAACAAATTCAACAAATAGCTTCGCAGTTGCGCCAGTTTGGGAAGATTGAAGGGAAGAACGTGTTCTACTGGTTCCAGAATCATAAGGCCAGAGAGAGACAGAAGCGGCGTAGAAGGGAAATGGAGGAAAATAATAATAACAATGCTGCTGCTTCTTCTTCTTCTGGTGAAGGGTTGAAAGAGACAGGTTGTGGAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAGTGGACATGCAGAGGAATCTGCACTGGATATAGCAGAAAAGGGATCTAATGGGTGGACTCAGTTTGAGGAGAGAGGCAGCATACAAGTTTTAAGGAGAAACATATCAGAAAAACAAGCTAAGTTGCAAGAAATGGAAATGCCTTGTTTCCTTCCTATTACTATAGCAGCTCCTACTACAACTTCACACAGAACAACAACACATAACACACAACTTTTATCCCCTCAAAACTATAATAATTTATCATCTTCACTCATCAACAGAGAAAGTTTAAACTACTATGGTGGTGATGAAAATGCAGATTCTCGAACCCTTGACCTATTTCCACACAAGAGGGATGACCAAGATGGAATTTCTCTTGCTGAGAGGAAATCATCATCTATGCTCTGTGCTAGTGCTTCTATGGACACTGAAATCACCTCCAACCAGTTTTTTGAGTTTCTTCCTTTAAGAAACTGA 1002 0.4271 MSDSFGSTFHSSAPNSTLNSHAPPKITTFCSIAQPYCICTHCNHILTFNHHVGNLAEEGTNSTGSHNNNVQSQPQHSTRWSPTPVQLLVLEELYKQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEENNNNNAAASSSSGEGLKETGCGVKETKKWASTSNCSGHAEESALDIAEKGSNGWTQFEERGSIQVLRRNISEKQAKLQEMEMPCFLPITIAAPTTTSHRTTTHNTQLLSPQNYNNLSSSLINRESLNYYGGDENADSRTLDLFPHKRDDQDGISLAERKSSSMLCASASMDTEITSNQFFEFLPLRN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02125 333 MobiDBLite consensus disorder prediction 135 165 - -
Gma07g02125 333 MobiDBLite consensus disorder prediction 1 20 - -
Gma07g02125 333 SUPERFAMILY Homeodomain-like 73 141 IPR009057 -
Gma07g02125 333 Coils Coil 134 154 - -
Gma07g02125 333 Pfam Homeodomain 77 137 IPR001356 GO:0003677
Gma07g02125 333 MobiDBLite consensus disorder prediction 59 80 - -
Gma07g02125 333 SMART HOX_1 75 142 IPR001356 GO:0003677
Gma07g02125 333 MobiDBLite consensus disorder prediction 148 162 - -
Gma07g02125 333 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 19 333 IPR044555 GO:0003700|GO:0099402
Gma07g02125 333 ProSiteProfiles 'Homeobox' domain profile. 73 138 IPR001356 GO:0003677
Gma07g02125 333 CDD homeodomain 78 132 IPR001356 GO:0003677
Gma07g02125 333 Gene3D - 60 154 - -
Gma07g02125 333 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 19 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02125 Gma-Chr7 43144224 43146298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02125 70 333 Wox Gene Family AT3G18010 33.866 6.11e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma07g02125 Homeodomain 2.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02125 - - gmx:102666678 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02125 07 43144224 43146298 Gma20g00166 20 1789376 1791444 GST