Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02108 ATGGCGGTTTTACCAAGTAGCTCCTCAAGCTTGGAATTGACCATATCTGTACCTGGTTTTGCTTCTTCACCAACCCTTCTTCCCTCATCATCTGTGAAAGAATTGGACATAAATCAAGTACCTCTTGAAGAAGATTGGATGGCATCAAACATGGAAGATGAAGAAGAAAGCAGCAATGGAGAACCTCCTCGAAAGAAACTCCGTCTCACAAAGGAACAATCTCTTCTCCTTGAAGAAAGCTTTAGACAAAACCACACGTTGAACCCAaagcagaaaGAGTCTTTGGCAATGCAACTGAAGCTGCGACCAAGGCAAGTGGAGGTGTGGTTTCAGAACCGTAGGGCCAGGAGCAAGCTGAAGCAGACAGAGATGGAGTGCGAGTACCTCAAGAGGTGGTTCGGTTCCCTCACAGAGCAGAACCGGAGGCTCCAGAGGGAAGTGGAGGAGCTGCGAGCCATTAAGGTGGGCCCACCCACCGTGATCTCCCCTCACTCCTGCGAACCGCTCCCGGCCTCCACACTTTCCATGTGTCCCCGCTGCGAGCGTGTCACCTCCACCGCCGACAAACCGCCCTCCGCCGCGGCCACTTTGTCCGCTAAAGTGCCGCCAACTCAATCCCGCCAACCCTCCGCGGCCTGTTGA 642 0.528 MAVLPSSSSSLELTISVPGFASSPTLLPSSSVKELDINQVPLEEDWMASNMEDEEESSNGEPPRKKLRLTKEQSLLLEESFRQNHTLNPKQKESLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAIKVGPPTVISPHSCEPLPASTLSMCPRCERVTSTADKPPSAAATLSAKVPPTQSRQPSAAC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02108 213 CDD homeodomain 63 121 IPR001356 GO:0003677
Gma07g02108 213 Gene3D - 56 128 - -
Gma07g02108 213 SMART HOX_1 62 124 IPR001356 GO:0003677
Gma07g02108 213 Pfam Homeobox associated leucine zipper 120 152 IPR003106 GO:0006355|GO:0043565
Gma07g02108 213 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Gma07g02108 213 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Gma07g02108 213 MobiDBLite consensus disorder prediction 43 67 - -
Gma07g02108 213 PANTHER - 1 195 - -
Gma07g02108 213 Pfam Homeodomain 64 118 IPR001356 GO:0003677
Gma07g02108 213 SMART halz 120 163 IPR003106 GO:0006355|GO:0043565
Gma07g02108 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17 1 195 - -
Gma07g02108 213 MobiDBLite consensus disorder prediction 198 213 - -
Gma07g02108 213 SUPERFAMILY Homeodomain-like 49 121 IPR009057 -
Gma07g02108 213 MobiDBLite consensus disorder prediction 183 213 - -
Gma07g02108 213 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02108 Gma-Chr7 42917253 42922543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02108 32 194 Homeobox Transcription Factor Family AT1G70920 63.095 4.94e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma07g02108 Homeodomain 5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02108 K09338 - gmx:100775341 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02108 07 42917253 42922543 Gma20g00131 20 1372148 1376599 GST