Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02089 ATGGCAAGAAAAACCAAGTCCATTTTCTTGGCCTTCTTACTACTATGCTCTTTCTCACTGGGGGTAGTGGTAGTAGCCCAAGAGGAGGCAATAGCAAAATCCGAAAGTGAAGCATTAGGGGAACCAGAGAAAAGAGAAACACTTGAAATCATCATTGGTGGAGGTGGTTCACCTGCTCCTTCTCCCTCTCCCCCTACATATTGCCCACCTCCTCCACCAAAACCACTGAGCCGGTTGGAGAAAGCAAAACGTGTTCTTCTCAAATTCAAAACCACAATCGACGACCCCAATTGTTACACGCAAAACTGGAGCCAGGACACAGACGCGTGTAAATTCAATGGGGTACGATGCGCCAATTTCCCAGACGATCAGCAGCGAGCAGTAGCTGGACTTGACCTAAACGGAGCAAAACTCGCCACTAAAAACGGTGGCAATTTGCCCCTCACGGGTCTCCTCGACAGCATACCCGAGTTAACATTCTTCCACGTTAACTCCAACAACTTCTCCTTCGTCGGTGGCTTCCCCAACAACATTACCAGGTTCCGTTTCTTCTTCGAGCTTGATCTCAGTAACAACAAAGTCAGTGGCAAGTTCCCAACGCAAGCAATTCAGAACAACCAGTTAGTCTTCCTGGACCTCAGGTTCAACCAGCTCACCGGGCCCATTGACCCGAAACTCTTCGAGAGGGACCTGGACGTGATTTTTGTGAACAACAACAAGTTCACGGGGTACCTCCCGGAGAATTTCGGGTCCACGCCGGCCCGGTACCTCACGTTTGCCCACAACAGCCTCTCGGGCTCGCTCCCTAAGAGCGTGGGCTACGCGCCGAACCTCACCGAGGTTCTCTTCTTGAAGAACCAGTTCGAAGGGTGTCTGCCCTTCGAAATCGGTTACCTCAAGAAGGCCGTAGTGTTTGATATAAGTGAAAATCTCTTGACCGGTCCCATCCCGCTCTCCTTCGGATGCCTGAAGAAAATTCAATTTCTCAATTTGGCGCACAACAAGCTCTACGGCTGTGTTCCCGACAACCTTTGCCAAATTCCTTCTATCCGCAACAATGGGAATCTCTCTTTGGCGAACAATTATTTCAACGAAATTGGACCTTCGTGTTGGAGTTTGATAAAGTCCAAGGTTTTGGATGTGTCAGGAAACTGCATTCCGGGGCTTCCTAACCAAAAGTCTCCCAAAGAATGCTACCAGTTTTACAAAACAAAGAAAACATGTCCGAACCCGAATTCATTTTACTACGTTCCGTGCAAATCGTACTGGGGGAGGCAGAGCAAGCCCACTAGTCCACCTTCTGAGCCAGTGACTTACAAGACTCTCAAACCACATCGTCTCAGATTGTGA 1350 0.4904 MARKTKSIFLAFLLLCSFSLGVVVVAQEEAIAKSESEALGEPEKRETLEIIIGGGGSPAPSPSPPTYCPPPPPKPLSRLEKAKRVLLKFKTTIDDPNCYTQNWSQDTDACKFNGVRCANFPDDQQRAVAGLDLNGAKLATKNGGNLPLTGLLDSIPELTFFHVNSNNFSFVGGFPNNITRFRFFFELDLSNNKVSGKFPTQAIQNNQLVFLDLRFNQLTGPIDPKLFERDLDVIFVNNNKFTGYLPENFGSTPARYLTFAHNSLSGSLPKSVGYAPNLTEVLFLKNQFEGCLPFEIGYLKKAVVFDISENLLTGPIPLSFGCLKKIQFLNLAHNKLYGCVPDNLCQIPSIRNNGNLSLANNYFNEIGPSCWSLIKSKVLDVSGNCIPGLPNQKSPKECYQFYKTKKTCPNPNSFYYVPCKSYWGRQSKPTSPPSEPVTYKTLKPHRLRL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02089 449 Pfam Leucine rich repeat N-terminal domain 82 117 IPR013210 -
Gma07g02089 449 Gene3D Ribonuclease Inhibitor 79 253 IPR032675 -
Gma07g02089 449 Gene3D Ribonuclease Inhibitor 254 414 IPR032675 -
Gma07g02089 449 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 436 - -
Gma07g02089 449 PANTHER BNAC05G26270D PROTEIN 12 436 - -
Gma07g02089 449 SUPERFAMILY L domain-like 82 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02089 Gma-Chr7 42648962 42651006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02089 78 401 Leucine-rich Repeat extension Gene Families AT4G13340 42.508 5.29e-73 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02089 - - gmx:100781948 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02089 07 42648962 42651006 Gma20g00114 20 1125705 1127393 GST