Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02076 ATGCAAGGACAAAGGAGGACTATTGGATCATTTCCAGCAATTGTAAGTATGATGCAAGGGCCCAGTTCTAGTGGCACTGATATGAGTCATCAGTCTTCCTTGAATCATGTGCAAAATGCAGTAGATTTCCGGTTGTCAGATTACAGGGGATCTTCTGGTGAGACTGCATGTTTACGTGGCACTGGTCATAATGTTCAGAGCTTCAATGGCTGGAGTACTGGTGAATCTAGTTCTAGACTGAATCTGATCAACCAAGTCAATGATGAAGGTCTAAAATCAGAACATGGGCTGTCTTCTTCGTATAATGCTGCTACTGAGGATGGTCTCAGGTCTGAGGAAAGACAATTCGAACCAAATAATGTAATTTTTCCTGTTAGTTCAAATACTAATCTACATGGCAATCAATCTAGAGTCCACCCTTCCTTTTTGCAAGGTTCCAGTTCTACTCGTATTAGCCAGAATATTAGTCTAGATATGGGGCATGTTACTAATGCTGCTGATCGTGGGAAGGGCAAAGAAGCTGGTAGTAGTGTTAATGCCAACAATACTAGTGGAATAGATAGAGAAAAGACATTGTTTGGCAGTGCTTCTTGTAATCACATAGGAGCTTCATCTGAAAGCTCTGGATACATGGCTCAGGGTGATAGTGCTAATTCAAGTTCTTCTTTAGTTAATTGGGGTCCTTCCTGCAAGAGAAAGGCTCTTGAAGGTAGTTCTAGGCAACTGTGCTCTGGAGGAAGCTCAAGCACTCTTGTACAATCTGGTAATGGTTGCTGGCCTATTGACCCTGTTGATCTTAATGCTTCTAGCAGCTTAAGTGATTCTACACCTATAGAAGATATTCCTGTTACTAGTCCTCCATTATTTCAGAATGCAAGAAATGAAGTGAGACAAGAAGCTTCCAATGCATTTCCTTTGATAAGTATTGCAGAAAATGTGGAAAGGCCTCTAAGAAACTTTGATAGAAGAATGGGCCATCTACAGCATCAGGAATCTGTACCTCTCAATTTACCATCAACAGGGAGTGCTAGGCATCATAATCATTCTTCTCTGCATCAAATACCTGGCTCTCACTCAATCAATGATTCATTGGAATTGAGGTTAACAGCTGGAGTGTCATCTGCTAATTCTGGTGCTTCTCTGAACCAATCACCTGCCTTGCGCATCCATTCTTTTCCTTGGAACAGAACTGCCAATCGTAGAGGGGCCAGGTCTTCAACTTCTTATAACTCTGGAGAAAGAGCTGTCTGGGAAGATTTTAATTTGAGAATGTTTCCAAGAGATAGTACTGAACACCCCATGAATGTGCCTGCGTCTTCAGGACATGAACCTACTGGTTGGCATACACCATCTGGTAATGTGAATAATTCTGGAGGTGTACCTCCTCCATCCTGGATTGGATCTAGTTCAAATGTTCACTCTCCCCCTAACCCTAGCTGGATTTTTAATCATGAAGTCCCAGCAGAAAATATGCAGAGTGTGTCAGAGTTCAGTCCCTGGTCCCTTTTTCCATCAATTAGCTCTGCATCTGGTGTTCATAATGGCCATTCAGCCCCATCTTCTTCTGGTCCTCCTTCATTTACCCAGGGTTCTAGCAGCAACCAACCATATGCAAGAACAGCATTGTTGATGGAAAGAAGGGGTGGTGATGTTCTCTCTGGTCCCCATTCACTGCGAGCATTAACCTTTGACAATGAGGGGAGACGTCGACTAATATCTGAGATTCGCCAAGTCTTGATGGCAATGCGGAGGGGTGAGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCTTTCCTATATCATGGCATGGCTGAAATGCATGACAGGCACAGAGAAATGCGCCTTGATGTCGACAACATGTCTTATGAGGAGTTGTTGGCATTGGAGGAGCGTATAGGAGACGTGAGCACTGGATTGAGTGAGGACATCATTATTAAGTTGATGAAACAACGAATTTACGTGTCTGTCATGACAGACTCTTCTATTGATTTGGAACCTTGCTGTATCTGTCAGGATGAATTTGCTGATGGAGAGAATGTTGGATCACTGGATTGTGGGCATGAGTTCCATAGTGGCTGCATCAAGCAGTGGCTAATGCAGAAGAACCTCTGCCCTATTTGCAAAACAACCGCCTTAGCTACTTGA 2148 0.433 MQGQRRTIGSFPAIVSMMQGPSSSGTDMSHQSSLNHVQNAVDFRLSDYRGSSGETACLRGTGHNVQSFNGWSTGESSSRLNLINQVNDEGLKSEHGLSSSYNAATEDGLRSEERQFEPNNVIFPVSSNTNLHGNQSRVHPSFLQGSSSTRISQNISLDMGHVTNAADRGKGKEAGSSVNANNTSGIDREKTLFGSASCNHIGASSESSGYMAQGDSANSSSSLVNWGPSCKRKALEGSSRQLCSGGSSSTLVQSGNGCWPIDPVDLNASSSLSDSTPIEDIPVTSPPLFQNARNEVRQEASNAFPLISIAENVERPLRNFDRRMGHLQHQESVPLNLPSTGSARHHNHSSLHQIPGSHSINDSLELRLTAGVSSANSGASLNQSPALRIHSFPWNRTANRRGARSSTSYNSGERAVWEDFNLRMFPRDSTEHPMNVPASSGHEPTGWHTPSGNVNNSGGVPPPSWIGSSSNVHSPPNPSWIFNHEVPAENMQSVSEFSPWSLFPSISSASGVHNGHSAPSSSGPPSFTQGSSSNQPYARTALLMERRGGDVLSGPHSLRALTFDNEGRRRLISEIRQVLMAMRRGENLRAEDYMLFDPFLYHGMAEMHDRHREMRLDVDNMSYEELLALEERIGDVSTGLSEDIIIKLMKQRIYVSVMTDSSIDLEPCCICQDEFADGENVGSLDCGHEFHSGCIKQWLMQKNLCPICKTTALAT 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02076 715 MobiDBLite consensus disorder prediction 91 111 - -
Gma07g02076 715 MobiDBLite consensus disorder prediction 337 358 - -
Gma07g02076 715 CDD RING-H2_TTC3 667 709 - -
Gma07g02076 715 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 715 - -
Gma07g02076 715 ProSiteProfiles Zinc finger RING-type profile. 668 709 IPR001841 -
Gma07g02076 715 MobiDBLite consensus disorder prediction 429 472 - -
Gma07g02076 715 SMART ring_2 668 708 IPR001841 -
Gma07g02076 715 SUPERFAMILY RING/U-box 649 712 - -
Gma07g02076 715 MobiDBLite consensus disorder prediction 511 534 - -
Gma07g02076 715 Pfam Ring finger domain 668 709 IPR001841 -
Gma07g02076 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 632 713 IPR013083 -
Gma07g02076 715 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 715 IPR045191 GO:0061630
Gma07g02076 715 MobiDBLite consensus disorder prediction 91 106 - -
Gma07g02076 715 MobiDBLite consensus disorder prediction 165 186 - -
Gma07g02076 715 MobiDBLite consensus disorder prediction 442 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02076 Gma-Chr7 42484689 42488152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02076 1 715 C3H Transcription Factor Family AT2G15530 38.286 6.35e-120 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02076 - K19041 gmx:100809024 1434.85