Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02075 ATGCCTGGGAGTTTAGAACCGTTAGATTTGGGTGTTCACATACCCTACCACTTCCGATGCCCTATCTCGCTCGAACTCATGCGAGACCCAGTAACTGTCTGCACCGGTCAAACCTACGACCGCGCCAGCATCGAGGCATGGGTCAGCACCGGCAACACCACATGTCCGGTCACACGCGCCACTCTCACCGACTTCACCCTAATCCCGAACCACACCCTTCGCCGCCTTATCCAAGAGTGGTGCGTTGCTAACCGCGCTTTTGGCGTCGAGCGAATCCCCACTCCCAAACAGCCCGCAGACCCTGCCTTAGTTCGCTCTCTCCTCAACCAAGCTTCTTCCGATTCTGCCCCTGCTCACCTTCGCCTTTCTTCTCTCCGCCGACTCAGACAACTCGCTCGCGACTCGGACAAGAATCGTTCTCTCATTGCCTCTCACAACCTTCTCCAGATCCTTCTCCCAATCGTTTTCAACAACGGTTCTGACGAGTTGAGTCACGAGTCGCTCGCGCTGCTCGTTATGTTTCCGCTCGGCGAGTCGGAATGTGCTTCGCTCGCATCTGATTCGATGAAGATTGGCTATTTATCGCGGATGTTGGCGCATAACTCGTTCGACGTCCGAGTCAACTCGGCCGCGTTGGTTGAGATCGTCGTCGTCGGGACGCACTCGCCGGAGTTACGCGCGGAGGTGAGCAGTGTCGACGAAATCTACGACGGAGTGGTGGATCTGCTCCGGAGCCCGATCTCTCACCCGCGCGCGCTCAAGATCGGGATCAAGGCCTTGTTCGCGCTTTGTTTGGTGAAGAATACGCGGCAGAAGGCGGTGGCCGCCGGCGCGCCGGCGGTGCTCGTGGACCGGCTGGCGGACTTTGAGAAGTGCGACGCGGAGAGGGCGCTGGCCACGGTGGAGCTGCTCTGCCGGATTCCGGCGGGATGCGCGGCGTTTGCAGCGCACGCGCTGACGGTGCCGATGCTGGTAAAGATAATCCTGAAGATCTCCAACCGCGCGACGGAGTACGCCGCTGGTGCGCTGCTCTCGCTGTGCTCGGAGTCGGAGCGGTGCCAGCGCGAGGCGGTGGCGGCGGGCGTGCTGACTCAGCTTCTGCTTCTCATGCAGAGCGATTGCACGGAGAGAGCGAAGAGGAAGGCGCAGATGCTGCTGAAGCTTCTTCGGGATTCGTGGCCGCAAGATTCCGTCGGAAACTCTGACGATTTTGCATGCAGTCAGAACAGAACACGATAA 1239 0.5956 MPGSLEPLDLGVHIPYHFRCPISLELMRDPVTVCTGQTYDRASIEAWVSTGNTTCPVTRATLTDFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPADPALVRSLLNQASSDSAPAHLRLSSLRRLRQLARDSDKNRSLIASHNLLQILLPIVFNNGSDELSHESLALLVMFPLGESECASLASDSMKIGYLSRMLAHNSFDVRVNSAALVEIVVVGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSVGNSDDFACSQNRTR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02075 412 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Gma07g02075 412 SUPERFAMILY ARM repeat 103 389 IPR016024 -
Gma07g02075 412 CDD RING-Ubox_PUB 18 59 IPR045210 -
Gma07g02075 412 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 406 - -
Gma07g02075 412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Gma07g02075 412 Gene3D - 290 390 IPR011989 -
Gma07g02075 412 Gene3D - 89 288 IPR011989 -
Gma07g02075 412 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Gma07g02075 412 PANTHER WDSAM1 PROTEIN 4 406 IPR045185 GO:0061630
Gma07g02075 412 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Gma07g02075 412 SUPERFAMILY RING/U-box 12 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02075 Gma-Chr7 42470035 42472059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02075 1 408 U-box Gene Family AT1G49780 65.550 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02075 07 42470035 42472059 Gma02g00939 02 9958853 9962844 GST