Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02057 ATGTCCTCTTCTTCCTTCTCCCCCGCCACTCTCACCACCGAGCAGGAGCTTTCCGTCATCGTTGCCGCCCTTACCAACGTCGTCGCCGGCTCCACCTCCGCCTCCAGCTCCTTCTCCCTCCCCGAATTCCGCCTTCCACAGACCTCTGATCCTCTCGCCGCCGCCTGCCTAATGCCGCCGCCGCCGCCGCCGAGCATGGACACTTGTCGCGAGTGCAACATCGCAGGATGCCTGGGATGCAACTTTTTCCCGGAGGAGAAAAAGAAGCAGAAGAGGGCCAAGAAGAAGTACAGAGGCGTGAGGCAGAGGCCCTGGGGAAAGTGGGCCGCGGAGATTCGTGACCCTCGTCGTGCTGCCCGGGTCTGGCTCGGCACGTTCGGAACCGCCGAGGATGCCGCCCGGGCCTACGACAAGGCCGCGATTGAGTTCCGCGGCCCACGGGCCAAGCTCAATTTCCCCTTGGTGGACGAGTCGCTCACTTTGCAGCAGAGCGAGCCAGAGAGGGTTCAAACAGAAGAAGAGCAAATAAAGACAGAGAATCTCAATCAAGGTATGGAAATGGATTCATTCGGGAACAAGGATACCGAATTCTGGGACAGGATTAACGAAGCTGATTTTCATCAGCTCATGATGATGATGGATTTTGCTGGAGATTCTTCCGACTCTGCCACTGGGAACGCTCTTAGTTCTTGA 693 0.5786 MSSSSFSPATLTTEQELSVIVAALTNVVAGSTSASSSFSLPEFRLPQTSDPLAAACLMPPPPPPSMDTCRECNIAGCLGCNFFPEEKKKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFGTAEDAARAYDKAAIEFRGPRAKLNFPLVDESLTLQQSEPERVQTEEEQIKTENLNQGMEMDSFGNKDTEFWDRINEADFHQLMMMMDFAGDSSDSATGNALSS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02057 230 ProSiteProfiles AP2/ERF domain profile. 96 153 IPR001471 GO:0003700|GO:0006355
Gma07g02057 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 4 225 - -
Gma07g02057 230 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Gma07g02057 230 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Gma07g02057 230 CDD AP2 97 153 IPR001471 GO:0003700|GO:0006355
Gma07g02057 230 SUPERFAMILY DNA-binding domain 96 154 IPR016177 GO:0003677
Gma07g02057 230 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 225 - -
Gma07g02057 230 SMART rav1_2 96 159 IPR001471 GO:0003700|GO:0006355
Gma07g02057 230 Gene3D AP2/ERF domain 95 155 IPR036955 GO:0003700|GO:0006355
Gma07g02057 230 Pfam AP2 domain 96 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02057 Gma-Chr7 42202521 42203213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02057 11 161 AP2-EREBP Transcription Factor Family AT4G34410 48.677 3.02e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g02057 AP2 3.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02057 - - gsj:114420690 422.165