Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02027 ATGGGTTCGGTTGCCGCAGAAGAACTGAACTTAGATTTAAGATCCTCCTTCGTCCCCAAAACCATCACCGATTTCCTCCGCCACCTCTCCGCCAACAACAACCACCCTGCCACCCTCCGCGATTTCCTCTCCCGCCTCGAAGACGAGCTCCGCAAGATCCACGCCTTCAAACGCGAACTCCCCCTCTCCATGCTCCTCTTAAACGACGCAATTTCCGTTCTGAAGGTTGAATCGCAGAAATGCTGCAGGGTGGCGCGCGATTCGCCGCCGGTGCTGGAGGAGTTCATTCCGTTGAAGAAGGAGCTTGGTGATCAGAGCGAGGAGGAGGAGGAGAATGATGATGACAAGGACGATAACGAATGCAGGGATAAGAGGAATTGGATGAGTTCCGTTCAGCTCTGGAATAACAACACTACCACCACTACTACTAATAACAACAACAATGCCTCTGATCGCAAACAGCTACTTCATAAATTACAAACCAAGAAAAGTGAAGAAGGGCAGTCTGTGGCTGAGGATCCTTTTCAGACTTGTAGTAATAGAAATGGGGGAAGAAGGGCATTTATGCCTTTCTCTAGGTACTCTTCTTCATCATCATCTGTGCCGGTGACAACAGTGGGGCTGGGGGCTGCATCCAAAGAAGAGAAGGAAGAGAGTGTTAGGAATAGGCTTTCTCTTCTGACGCCTTCTGTGAAAGAAGGGTGTGGTTCAAGGGGATCAAGGAGCAGTTCTAACAGGGCTGTTTCTTCTTCTCCTCCCACGGCTCAGCCGGGTTTGCGTGCGACTTCGCTTCAGCAGACTGCTAGGAAACAGAGGAGGTGCTGGTCCCCTGAGTTGCACAGACGATTCGTTAATGCCTTGCAGAAGCTTGGAGGTTCTCAAGCAGCTACACCAAAGCAAATTAGAGAGCTTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCAGTTGTGGTTCTTGGAGGTTTGTGGATGTCTCAAGATCAGTACAATGACTCTTCAAAAGTTAGCAGTTCAGGGTCAGGTTCTCCTCAAAGTCCTCTTCATTTGGCTGCAGGGTCCCGGGGAGGGACATCTCCTACTGAAGGTGACAGCATAGAAGATGATGAAGATGCAAGATCCGAGAGTTATAGTTGGAAAAGTCATATGAACAAACCAGGAAAAGTTGATGTATAG 1239 0.4891 MGSVAAEELNLDLRSSFVPKTITDFLRHLSANNNHPATLRDFLSRLEDELRKIHAFKRELPLSMLLLNDAISVLKVESQKCCRVARDSPPVLEEFIPLKKELGDQSEEEEENDDDKDDNECRDKRNWMSSVQLWNNNTTTTTTNNNNNASDRKQLLHKLQTKKSEEGQSVAEDPFQTCSNRNGGRRAFMPFSRYSSSSSSVPVTTVGLGAASKEEKEESVRNRLSLLTPSVKEGCGSRGSRSSSNRAVSSSPPTAQPGLRATSLQQTARKQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASSNQPVVVLGGLWMSQDQYNDSSKVSSSGSGSPQSPLHLAAGSRGGTSPTEGDSIEDDEDARSESYSWKSHMNKPGKVDV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02027 412 MobiDBLite consensus disorder prediction 235 272 - -
Gma07g02027 412 PANTHER TRANSCRIPTION FACTOR HHO6 8 405 - -
Gma07g02027 412 SUPERFAMILY Homeodomain-like 267 328 IPR009057 -
Gma07g02027 412 Gene3D - 269 327 - -
Gma07g02027 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 267 327 IPR017930 -
Gma07g02027 412 MobiDBLite consensus disorder prediction 161 183 - -
Gma07g02027 412 MobiDBLite consensus disorder prediction 351 412 - -
Gma07g02027 412 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 405 IPR044787 GO:0003700|GO:0006355
Gma07g02027 412 MobiDBLite consensus disorder prediction 97 122 - -
Gma07g02027 412 MobiDBLite consensus disorder prediction 209 273 - -
Gma07g02027 412 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 270 325 IPR006447 GO:0003677
Gma07g02027 412 Pfam Myb-like DNA-binding domain 272 323 IPR001005 -
Gma07g02027 412 MobiDBLite consensus disorder prediction 351 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02027 Gma-Chr7 41818077 41821009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02027 4 346 G2-like Transcription Factor Family AT2G03500 39.118 7.29e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma07g02027 Myb_DNA-binding 3.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02027 - - gmx:100812420 743.421