Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02015 ATGGTGAACGACTTCATTGTCTGCATTGACCGGATCATAGCCTCCACGACCTGTTTTGGATCAGTGAATGAAAAACACTGTGATGGTGTTGACCCAGTTATAATCCCCGTCTCTGACAATGGTGGAAAAGTGTGCTCCTCTTCTTCTTCTTCTTCATCTTCAAACAAGGATGATGATGTTGTTGTTGTTGTTGAGTGCAGAATATGCCAGGAAGAAGACCAAGCACAAGCCATGGAGGCACCTTGTTCTTGCAATGGCACTCTCAAGTTTGCTCATAGAAAGTGTATCCAAAGATGGTGCAATAAGAAAGGAAATACAATATGTGAAATCTGTAATCAGGCATTTTCACCAAATTATTCTCTTCCACCGGTCAGAAGCAATGCAATTATGACGAATGATATTAGGCAAGAATGGGGGCACAATGCTGATCTCCGTGTGGCTCTAGCTTCAGCAGAGCAGCAGTTGCTGCAAACTGAATATGAAGATTATGCCATGTCACAAACCAGTAGCATTGCTTTCCTTCGCTCTGTGACTCTCATTATGCTGATGATTTTGCTTGTACGTGAAGCTTTAATGGTCACAAAGAACTCTGTAACTGGGCAAGATGCATCGATAATCTTTAATTTTGAGGTGTCACTCCTTCAATTTGCTGGTGTTCTTTTGCCATGCTTTGCAATGGCACGTTCCTGGTATGCCATACAGAACCGTAGGAGAAGACAGGGCTGA 726 0.4298 MVNDFIVCIDRIIASTTCFGSVNEKHCDGVDPVIIPVSDNGGKVCSSSSSSSSSNKDDDVVVVVECRICQEEDQAQAMEAPCSCNGTLKFAHRKCIQRWCNKKGNTICEICNQAFSPNYSLPPVRSNAIMTNDIRQEWGHNADLRVALASAEQQLLQTEYEDYAMSQTSSIAFLRSVTLIMLMILLVREALMVTKNSVTGQDASIIFNFEVSLLQFAGVLLPCFAMARSWYAIQNRRRRQG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02015 241 CDD RING_CH-C4HC3_MARCH 66 112 - -
Gma07g02015 241 Pfam RING-variant domain 66 111 IPR011016 GO:0008270
Gma07g02015 241 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 240 IPR033275 -
Gma07g02015 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 122 IPR013083 -
Gma07g02015 241 Pfam Protein of unknown function (DUF3675) 117 230 IPR022143 -
Gma07g02015 241 SUPERFAMILY RING/U-box 64 115 - -
Gma07g02015 241 ProSiteProfiles Zinc finger RING-CH-type profile. 58 118 IPR011016 GO:0008270
Gma07g02015 241 SMART ringv_2 65 112 IPR011016 GO:0008270
Gma07g02015 241 Coils Coil 141 161 - -
Gma07g02015 241 PANTHER OS01G0894600 PROTEIN 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02015 Gma-Chr7 41637465 41641030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02015 57 111 C3H Transcription Factor Family AT2G37950 43.333 7.05e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02015 - - gmx:100791501 474.167