Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02008 ATGAAAAGGTGTCCACATAGTCTTCCCATTGAAGTAAAGTTGGTTGAAGATGTCCACATTGACACTTTTAGGAGTTCTTCTATTCTAGTAACCTCTGCCAACCAACAAAACAAGCCTGAAAATAAAATAGAGATGCTGCCTCCTTGCTGGCGATCGTTCGGGAAGAAACAAGTTTTCACACACCACTCCAAAGGGAAGCAGGATTCAGATAATAACAAAGGCACAAAAGAGAAGAAGAAAAGTCTAGGAAAACTAAAGCATGGAGAGGCCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGTAGCATTGAGAAAATCTTTGGGGACTTTGAAAGGGAGCAACAACTACTGGGGTTAAGGCCTGCCACTCCTCCGGAGAGGCCTAAAACGCCACCTTATGCCCctccaagagctccttctcctaggcctccctctccaagggttccttctccaaggcctccatccccaagggctgcttctccgagggcggcttctccgCGAGTTACCTCTCCCAAAGCCACGTCTTCCCGGATTGCTCATCACCACAAGGAGGTTGGCCACAGACCAGAACCAACTTTGAGGCAACAGCAAGCCTCAGCTACTAAGATCCAGTCTGTTTACAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCTCTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAAAGGACAGAATGTGAAGAGGCAGACAGTGAATGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATGTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGATTTCAAGAATGATAAGGATGCAGCCAGTATCTTGGGCAAACTCACTTCTGAAGCAGGAAATGAAGAGTGGGATGATAGCTTACTGACCAAAGAGGAAGTAGAGGCAAGATTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGCTATGGAAAGCCACTCCAAAATCAACTCACACCCCAGTGACGGATACACGATCAGGTGGATTCCCTTGGTGGTGGAACTGGTTGGAAAGACAAACACCAGCAGCAACTCCACAAGAAAGACAAAGCTTGAAGAATTTTCAAATCACACCTCCAAGACCATACTCAGAGCAAAAGACTAGTCCAAGACCTGGCTCCAGCACTCAAAGGCAGCCGCAGCAGCAGCAGCCTCATTTTGCCTTTGATAACATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTGACATCTTCAAAACCGGCGCGAACGCCTCCATTTAGAACTCCTCAGGCAAACGGCTCAGGCTCAGGCTCTAGATATCCGAGACCAAGGGGTGTGGGGTCCAATTCACCCTTTGATGTGCCATTGAAGGATGATGACAGCCTCACAAGCTGCCCACCATTTTCAGTGCCTAACTACATGGCTCCAACCCTTTCCGCCAGGGCCAAAGTACGTGCTAGTAGTAATCCAAGAGAAAGGCTTGGTGGAACTCCAACTAGTACTGATTCAAAGAGGAGACTTTCATTCCCTTTGTCACAAGGAATTGGCTCTTTCAAGTGGTCCAAAGGGTTCTCAAACAAGGATCAAAGAGTCCCAGATAAATTTCAGTCACTTGAATCTATAGGAAACGTGAGTGTGGATTCAACGGTGTCTTTGCCCGCAAGGGTGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1734 0.4394 MKRCPHSLPIEVKLVEDVHIDTFRSSSILVTSANQQNKPENKIEMLPPCWRSFGKKQVFTHHSKGKQDSDNNKGTKEKKKSLGKLKHGEANSFIPLFREPSSIEKIFGDFEREQQLLGLRPATPPERPKTPPYAPPRAPSPRPPSPRVPSPRPPSPRAASPRAASPRVTSPKATSSRIAHHHKEVGHRPEPTLRQQQASATKIQSVYRGYMARRSFRALKGLVRLQGVVKGQNVKRQTVNAMKHMQLLVRVQCQIQSRRIQMLENQARYQADFKNDKDAASILGKLTSEAGNEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHTPVTDTRSGGFPWWWNWLERQTPAATPQERQSLKNFQITPPRPYSEQKTSPRPGSSTQRQPQQQQPHFAFDNMDTPTPKSTKSTIVTSSKPARTPPFRTPQANGSGSGSRYPRPRGVGSNSPFDVPLKDDDSLTSCPPFSVPNYMAPTLSARAKVRASSNPRERLGGTPTSTDSKRRLSFPLSQGIGSFKWSKGFSNKDQRVPDKFQSLESIGNVSVDSTVSLPARVVGRKPFTRFV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02008 577 Gene3D - 179 216 - -
Gma07g02008 577 ProSiteProfiles IQ motif profile. 196 224 IPR000048 GO:0005515
Gma07g02008 577 MobiDBLite consensus disorder prediction 124 160 - -
Gma07g02008 577 PANTHER IQ-DOMAIN 13 56 574 - -
Gma07g02008 577 Pfam IQ calmodulin-binding motif 198 217 IPR000048 GO:0005515
Gma07g02008 577 MobiDBLite consensus disorder prediction 503 518 - -
Gma07g02008 577 MobiDBLite consensus disorder prediction 364 448 - -
Gma07g02008 577 Pfam Protein of unknown function (DUF4005) 428 528 IPR025064 -
Gma07g02008 577 SMART iq_5 195 217 IPR000048 GO:0005515
Gma07g02008 577 MobiDBLite consensus disorder prediction 364 471 - -
Gma07g02008 577 MobiDBLite consensus disorder prediction 61 86 - -
Gma07g02008 577 MobiDBLite consensus disorder prediction 492 518 - -
Gma07g02008 577 MobiDBLite consensus disorder prediction 118 198 - -
Gma07g02008 577 PANTHER IQ-DOMAIN 5-RELATED 56 574 - -
Gma07g02008 577 MobiDBLite consensus disorder prediction 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02008 Gma-Chr7 41509440 41514995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02008 56 577 IQD Protein Family AT3G59690 50.540 1.74e-155 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02008 - - gmx:100807777 892.108