Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01995 ATGGTTTACTCCTTCTATGACAAAACCTCTTCTTCTGGCTCTGATATTTCGGGGTTGATCAATCCTACTTTGAACAACCTTGGAGCTTCCAATGGCGTTTCGCGGGGCGGCTTGTCATCACCACATTCTTTGGTTTTTGAGAGTGAGAAGGGAGAGCTAGTGAAGTGCCCTGCAACTGCAAAGGTAGGGAAGAGTGAGATTTGTGAGGCCAAAGCTTTGGCTGCTTTGAAGAACCATAGTGAAGCAGAGAGGAGGAGGAGGGAGAGAATAAACGCTCATCTTGCAACACTACGTGGCCTTGTGCCATCCACTGAAAAGATGGATAAAGCCACTTTACTGGCTGAAGTGATTAGCCAAGTGAAGGAATTGAAGAAAAATGCAGTGGAAGCAAGCAAAGGTTTTCTGATCCCAATGGATGCTGATGAAGTGAAAGTTGAACCATATGATGATGAAGGAGGAGATGGATCCATGTCTTACTGTGCAACTATCTGCTGTGATTTCAGATCTGAAATACTATCTGACCTAAGACAGGCCCTTGATTCCCTTCCACTGCATCTAGTCAAGGCAGAAATTTCAACTTTGGCAGGTAGAATGAAGAATGTGTTTGTCTTCACGTGTTGCAAAGGAAACATTAATAATATTGATATTGAAAAATGCCAAGCTCTTGCAAGTACTGTTCACCAGGCACTATGTTCTGTGCTGGATAAGGCTTCTGCCACACTGGATTTCTCACCAAGAACATCGCATGCAAGCAAGAGGAGAAGATTATGCTTTATTGAAACATCCACTTCCTCATGCAACCACGGATCTTGTTTGTGCTGA 822 0.438 MVYSFYDKTSSSGSDISGLINPTLNNLGASNGVSRGGLSSPHSLVFESEKGELVKCPATAKVGKSEICEAKALAALKNHSEAERRRRERINAHLATLRGLVPSTEKMDKATLLAEVISQVKELKKNAVEASKGFLIPMDADEVKVEPYDDEGGDGSMSYCATICCDFRSEILSDLRQALDSLPLHLVKAEISTLAGRMKNVFVFTCCKGNINNIDIEKCQALASTVHQALCSVLDKASATLDFSPRTSHASKRRRLCFIETSTSSCNHGSCLC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01995 273 PANTHER TRANSCRIPTION FACTOR BHLH30 3 266 IPR045847 GO:0003700|GO:0006355
Gma07g01995 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 125 IPR036638 GO:0046983
Gma07g01995 273 SMART finulus 80 129 IPR011598 GO:0046983
Gma07g01995 273 Pfam Helix-loop-helix DNA-binding domain 78 123 IPR011598 GO:0046983
Gma07g01995 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Gma07g01995 273 Gene3D - 71 132 IPR036638 GO:0046983
Gma07g01995 273 PANTHER DNA BINDING PROTEIN-LIKE 3 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01995 Gma-Chr7 41328645 41332447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01995 60 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.434 1.10e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g01995 HLH 8.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01995 - - gmx:100804756 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01995 07 41328645 41332447 Gma07g01995 07 41328645 41332447 ECH
Gma07g01995 07 41328645 41332447 Gma06g02545 06 48600750 48602842 ECH
Gma07g01995 07 41328645 41332447 Gma02g01277 02 14874514 14878838 GST